Gene Phep_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0807 
Symbol 
ID8251896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp955319 
End bp956155 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content38% 
IMG OID644934457 
Productrod shape-determining protein MreC 
Protein accessionYP_003091091 
Protein GI255530719 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAACC TTTGGATTTT CATAAACAGA TATAACGCAT TTTTTCTATT CATTATCTTT 
TTTGCAATTG GAATTATCCT TACCGTAAAA AACAACGCCT ACCAGCGCAG TGTAACTGTT
AACTCTACCA ACGAGGTAGT TGGCGAGGTA TACCAAAACC TGAATGTTCT GAAGAAATAC
ATTAACCTGG GAAATGTGAA CGACAGTCTT GCTCAGGAAA ATGCAAAGCT GAAAACAGAA
CTGCTTACAC TCAAAAGTAT AGACAGCGCT AAAAAAATTA CCGTTAAGGA TACGCTAAAT
AATCCGCAAT ACACCTATTT GTCGGCCAGG GTAATTAAGA ATTCCATTAC ACTCAGAAAC
AACGTCATCA CTATCAATAA AGGTACCGCA GATGGGATTG CACGCAATAT GCCGGTAATA
TCGCCGGGCA AAGGGGTAGT GGGCTTTATA ATGGATGTTT CGGAACACCT GGCAACAGTA
CGTTCCCTAC TGCACAAGGA TACCAAAATA AGTGTAAATA TAAAAAGTAA TAATGCCCTT
GGCTCATTGG TTTGGGGCAT TGGCAATTCC GATTTTACAA AGGCTTATGT AAAAGAGGTA
CCCAATCATT TTAAGGTAAA CCTGAAAGAT ACCATTGTAA CTTCCGGTTT TTCATCTTTT
CCTCCGGGGA TCCCGGTAGG AATAGTGACC AATACAGCAG TACCAACGGG TGATAATTTT
ATGTCCGTAG AAATTAAACT TTTCAACGAT TTTAGTACCT TACAATATGT GTACGTAATT
CTTGATAAAT ATGCCGCAGA ACAGAAAGAA TTAGAAGCAA AATTGCCAAA TGAATAG
 
Protein sequence
MRNLWIFINR YNAFFLFIIF FAIGIILTVK NNAYQRSVTV NSTNEVVGEV YQNLNVLKKY 
INLGNVNDSL AQENAKLKTE LLTLKSIDSA KKITVKDTLN NPQYTYLSAR VIKNSITLRN
NVITINKGTA DGIARNMPVI SPGKGVVGFI MDVSEHLATV RSLLHKDTKI SVNIKSNNAL
GSLVWGIGNS DFTKAYVKEV PNHFKVNLKD TIVTSGFSSF PPGIPVGIVT NTAVPTGDNF
MSVEIKLFND FSTLQYVYVI LDKYAAEQKE LEAKLPNE