| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0805 |
|---|
| Symbol | |
|---|
| ID | 8251894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 952865 |
|---|
| End bp | 954811 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644934455 |
|---|
| Product | penicillin-binding protein 2 |
|---|
| Protein accession | YP_003091089 |
|---|
| Protein GI | 255530717 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATC TGTTTGGCCG TAAATATGTA ATACAGGGTT TATTCATTGC CATTGGTTTA
ATCTTGCTGG GTACCCTGTT TTATATTCAG ATAGCGAGTG ATAAATATTT TCTTTCTGCA
GAATTTAACG TACTGCGCAA GATCTATACT TTTCCGGCAC GGGGGGTAAT ATTTGATCGT
AATGAAAAAC CACTGGCCCA GAATGAAGCT GTATACGATT TAATGGTGAT TCCCAACCAG
GTAAAGGAAA TGGATACATT AGCGCTGTGC AATATTATAG GTATAGATAC GGTCGCTTTC
AGAAAAAACC TGAAAAAAGT TTCCAACCAA TCGAGGTATC AGCCAGGCAT TTTTGAGCGG
CAATTATCCG TCGAAACTTA TGCCACTTTA TCGGAACAGC TTTCCAGGTT TCCCGGTTTT
TTTGTACAAA GCAGAACGAT CAGGCATTAT CCTGATAGTG TAGCCGCCCA TTTCCTTGGG
TATATTAAAG AAGTATCTTC TACCGACATT CAAAACTCTG AAGGCTATTA CCGCTCTGGT
GATTACATTG GTAAATCAGG AGTAGAAAAA TCGTACGAGA CTTTGTTAAG GGGAGAAAGG
GGCGTGGTTA ACATGCTGTA CGATGCCCGG AATGTTCCTA AGGGAAGCTA CGCAGAGGGC
CGGTTTGATA CTGCAGCGGT GTCTGGCGAC AGGCTCATCT CTTCTCTCGA CCTTAAGCTC
CAGAAGCTTG GTGAAGAGCT GATGCACAAT AAAGTGGGCA GCATTGTAGC CATAGAACCA
GCATCCGGGG AAATCCTGGC TTTTGTAAGC AGTCCGAGTT ACGACCCCAA CCTGATGGTA
GGTAGACAAT CAGGCAATAA TTATATGAAA ATATTGGTTG CACCGAACAG ACCTTTCACC
ATACGTCCGA TACAAGGTTA CTATTCACCT GGATCTTCTT TCAAACCTTT GGACGCTTTG
ATCGGTCTGC AGGAAGGTGT TATAGACCCA AACACCACAT TCAACTGTCC CGGATATTTC
CGCGTAGGGA ACCACACAGT AAAATGTGAG CACGTAGATG GCAATATCGC TTTGCGAAGG
GGGCTTGCCA GATCCTGTAA CACTTATGCC TGCTATGTGT TTCAAAAGCT GATTACACAG
CGGAAATACG CAAACCAGAA GCTTGCCTAT GACGACTGGC AAAAGAAGGT CAGAAAATTT
GGTCTGGGCG AAAAATCAGG GATAGACCTG CCATCTGAAC GTGCTGGACG TTTATACGAC
GCCGCCTATT ATTCTAAAAA ATACAGTAAA TACTGGAACT TTGGCACAGT GATTTCCCTG
GCCATAGGAC AGGGAGAAAT GGATGCTACC CCACTACAAA TGGCCAATAT TATGGCCATT
ATCGCCAACA GGGGCTATTA CATTAAACCC CACCTGGTAA AAGCCATCGG TAAAGACAAG
GTGATCAAAA AAGAATACGT CAAAAAGAAT TACGTAGATG TGGATGCGGT ACATTTTGAC
CCTGTAATTG ATGGTATGCA GGATGCTGTA AATGCACCAT GGGGAACCGC TATCCAATCG
AGGATCGAAG GCATTCTGAT GTGTGGTAAA ACCGGAACGG TACAAAATCC ACGTGGTAAA
AACCACTCTG TATTTATTGG TTTTGCCCCG CGGGACAATC CAAAAATTGC GATTGCCGTA
ATTGTGGAAA ATGCTGGTTA TGGCAGCACT TACGCTGCCC CCATAGCCAG CTATATTGCA
GAACAATACC TGAAAGGAAG CCTGCCTAAA AATAAACTGG CCCAGGTAGA ATGGATGAAA
AAACAGGTGA TCCTTCCGGT ACCGCCTAAG CCAAAGGTAA AACCCAAAGT AGATACAACC
GACTCGACAT TAAAAATAAT TCCGCAGGTA ATAAAGCCAG ACAATAAATC AACAGAAAAA
ACGGTAAACA AACCCACTAC AAAATGA
|
|---|
| Protein sequence | MDNLFGRKYV IQGLFIAIGL ILLGTLFYIQ IASDKYFLSA EFNVLRKIYT FPARGVIFDR
NEKPLAQNEA VYDLMVIPNQ VKEMDTLALC NIIGIDTVAF RKNLKKVSNQ SRYQPGIFER
QLSVETYATL SEQLSRFPGF FVQSRTIRHY PDSVAAHFLG YIKEVSSTDI QNSEGYYRSG
DYIGKSGVEK SYETLLRGER GVVNMLYDAR NVPKGSYAEG RFDTAAVSGD RLISSLDLKL
QKLGEELMHN KVGSIVAIEP ASGEILAFVS SPSYDPNLMV GRQSGNNYMK ILVAPNRPFT
IRPIQGYYSP GSSFKPLDAL IGLQEGVIDP NTTFNCPGYF RVGNHTVKCE HVDGNIALRR
GLARSCNTYA CYVFQKLITQ RKYANQKLAY DDWQKKVRKF GLGEKSGIDL PSERAGRLYD
AAYYSKKYSK YWNFGTVISL AIGQGEMDAT PLQMANIMAI IANRGYYIKP HLVKAIGKDK
VIKKEYVKKN YVDVDAVHFD PVIDGMQDAV NAPWGTAIQS RIEGILMCGK TGTVQNPRGK
NHSVFIGFAP RDNPKIAIAV IVENAGYGST YAAPIASYIA EQYLKGSLPK NKLAQVEWMK
KQVILPVPPK PKVKPKVDTT DSTLKIIPQV IKPDNKSTEK TVNKPTTK
|
|---|
| |