| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0787 |
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| Symbol | |
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| ID | 8251876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 930364 |
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| End bp | 933450 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934437 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003091071 |
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| Protein GI | 255530699 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTGTG CCTTTAGTGT TCTTGCCCAG CAAACACGAA AGGTTGAAGG GAAGGTGACA
GACCAGACCT CGGGCGATCC TTTAATTGGT GTCAGTGTGC TGGTTAAGGG AACTAAAACA
GGCGCAACTA CGGATAGGGA TGGACGTTAT GCCATCCAGG TTCCGTCGCA GGGAAACAGC
ACACTTGTTT TTAGTTATAT CGGCTATCTT CAAAGGGAGA TGAGCGTAGG CGATAAAGGT
GTGGTTAATC TAAGCCTTGC CGAAGATAGT AAAGTGCTGA ACGATGTAGT GGTAATTGGT
TATGGTACGG TCGCAAAAAG AGATCTTACT GGTGCTGTAG GCAGCGTAAA TATGAAAGAC
CTGCAAAAGG CACCTGTTAA ATCTTTTGAT GAAGCTTTGG CGGGCCGGGT TGCAGGGGTG
CAGGTGGCAT CAAACGACGG GCAGCCTGGT AATTCATTTA ACATTGTAGT ACGTGGACAA
AACTCCATCA CTCAGGACAA TTCGCCATTA TACGTGGTAG ATGGTTTTCC TTTGGAGGTA
TCTAACAACA ATGCCATTAA TCCTGCAGAT ATTGAATCTA TTGAAGTATT GAAGGATGCA
TCAGCAACAG CAATTTATGG AGCAAGAGGT GCGAATGGTG TGATCCTGAT CACAACAAAG
GGCGGAAAAA TAGGTGCGCC TGTTATTTCG TATACCGGTA CTGTGGGCTT TCAGCAAAAC
ACAAAAAGAA TGGATGTGAT GAGCCCATAC GAATTTGTAC GGCTGCAGGA AGAGATTGAC
CCGATCAATA CCCCGCTTCT TTATTATAAA GACGGAAAAA CACTCGACTC TTATAAAGAC
ATTAAAGGAA TCGACTGGCA GGACCAGGTA TTCAGGACGG CCCCTTCAAC AGAGCATAAC
CTGTCTTTAA CTGGTGGAAC CGAAAAAACA CAATATGTTA TATCAGGGTC TATCAATTCC
CAGGACGGAG TGATCATCAA TTCAGGCTTT AACCGTTACC AGGGCAGAAT GGCCATTACT
CAAAGAGTTA ATGATAAACT GAAGGTTTTC GCGAGTATCG ATTACAGCAA TATCAAGGCC
AGCGGTACTA TTCCTACTTC CGGAACCAAT TCGGCTACCA ACAACCTGTT GTATAGTGTA
TGGGGCTACA GACCTGTTAT GGGATCGGAC GGTAACCTGC TGGACCAGCT GTTTGATCCT
GATATTGATG GGTTGAATGA TTACAGGATA AATCCGGTAT TGTCGTCAAA CAACGAATTG
CGGAATGCAA CAACCAATAA TTTACGCATA AACTCTTATG CACAATATGC TTTCAATAAA
AACCTGACCC TGAAGGTTTC GGGTGGTATT TCCAATAACC TGCGCAGAAA TGATGTTTTT
TATAACAGCC AAACTTATTA TGGTGGACCA AGCAGTACCA ATAAAGTAAA CGGATCTATC
ATTTATACAC AAAATACCAG CTGGCTAAAT GAAAACATCT TAACTTTTGC CAAAAGATTT
AATAAGGTTC ACAACCTGAA CATAGTAGCA GGTATTACCA TGCAGGAGGA TAAATATTCG
CGATATGGTT TGGCTGCTAT ACAGTTACCG AATGAGTCGG CCGGTTTGGA TGGTTTATCT
CAGGGTACAC CGCTGCCGGT TACAGCAGAA AGCTCGAACA GCAAGCTGCT CTCTTTTTTA
GGCCGGGTTA CCTACGATTA TAAGTCTAAA TATTTATTAA GTGCTTCTTT CAGGGCCGAT
GGTTCTTCTA AGTTTTTACC AGGTAAGCGC ACCAGTTATT TTCCTTCGGG ATCAATTGCC
TGGAGAATGA GCAACGAAGA CTTTATGAAA GCCCTTCCAT TTGTAAATGA TGCCAAACTG
AGGGTGGGCT ATGGCGTAAC CGGTAATAAC AGGGTGGGCG ATTTCTCTTA CCTTTCTGTA
TTGGGATTCC CTATTGGTGG GTCTTATGGT TTTAACAACA CGGTGAGCAT AGGTGCTATT
CCTTTAACTT ATGGCAACCC TGACCTGAGA TGGGAAAGTA CAGCCCAGGC CAATATTGGG
TATGACCTGA GCCTGTTTAA GGACAGGATA GGTTTTACTG CCGACGTTTA CCGTAAAAGC
ACTTACGATT TATTGCTGAA TGCTGATTTG CCTTATACTA CCGGTTATGA AACAGCATTT
AAAAATATTG GTAAAGTAAG AAACGAAGGC CTTGAATTTA CCTTAAACAC AAGGAACATC
GACAATAAAG ATTTTAAATG GTCATCCAGT TTTAACATCA GCTTTAACCG TTCAAAGGTA
ATGGCCCTGA ATGCGGGACA ATCGTTTAAA ACCACACCGA TCAGCTGGGA GAATTCCTAT
AATGCCACAC CATTGTATAT TGCAAATGTT GGCCAGCCAA TTGCCCAGTT TTATGGCTAT
GAGTTTGATG GTGTATACCA GTACAGTGAT TTTAATGAAA ACAGTCCCGG TGTATTTACA
CTGAAAGATG ATGTGCCAAA CAACGGGAAT GCGAGAAACA GCATTAAACC TGGCGACATT
AAATACAAGG ATCTGGATGG GAACCTGGTT GTAGATGCTA AAGACCGCAA AGTAATTGGT
CGCGGCCAGC CCATTCATGT AGGTGGTTTT ACCAATAACT TTACCTATAA AAACTTTGAC
CTGAGCGTAT TTTTGCAATG GTCTTATGGC AACGATATCT ACAACGCCAA CAGGATGTTG
TTTGAAGGAA ATATGCTGGA CAAAAAGAAC CTGAACCAGT TTGCGAGCTA TGCAGACCGC
TGGACACCAG ATAACCCAAG CAATACACTT TACAGGGTTA AAGGACAAGG CCCGGCAGTA
TATTCTTCAA GGGTAATAGA AGACGGATCT TTCCTGCGGA TCAAAACAGT TTCCCTGGGA
TACAATTTTA GCGCTGATGT GCTGAAAAGG ATTAAACTGA AAAGTCTGAG GGTTTCGGCT
TCGGGGCAAA ATTTATACAC TTTTACAAAA TATACCGGAA TGGATCCTGA AGTATCTGTA
AGGAATTCGG CATTGACCCC TGGATTTGAT TACTCGGCTT ATCCAAGGGC AAGGGCAGTT
GTTTTTAGCC TGAATACTTC ATTTTAA
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| Protein sequence | MICAFSVLAQ QTRKVEGKVT DQTSGDPLIG VSVLVKGTKT GATTDRDGRY AIQVPSQGNS
TLVFSYIGYL QREMSVGDKG VVNLSLAEDS KVLNDVVVIG YGTVAKRDLT GAVGSVNMKD
LQKAPVKSFD EALAGRVAGV QVASNDGQPG NSFNIVVRGQ NSITQDNSPL YVVDGFPLEV
SNNNAINPAD IESIEVLKDA SATAIYGARG ANGVILITTK GGKIGAPVIS YTGTVGFQQN
TKRMDVMSPY EFVRLQEEID PINTPLLYYK DGKTLDSYKD IKGIDWQDQV FRTAPSTEHN
LSLTGGTEKT QYVISGSINS QDGVIINSGF NRYQGRMAIT QRVNDKLKVF ASIDYSNIKA
SGTIPTSGTN SATNNLLYSV WGYRPVMGSD GNLLDQLFDP DIDGLNDYRI NPVLSSNNEL
RNATTNNLRI NSYAQYAFNK NLTLKVSGGI SNNLRRNDVF YNSQTYYGGP SSTNKVNGSI
IYTQNTSWLN ENILTFAKRF NKVHNLNIVA GITMQEDKYS RYGLAAIQLP NESAGLDGLS
QGTPLPVTAE SSNSKLLSFL GRVTYDYKSK YLLSASFRAD GSSKFLPGKR TSYFPSGSIA
WRMSNEDFMK ALPFVNDAKL RVGYGVTGNN RVGDFSYLSV LGFPIGGSYG FNNTVSIGAI
PLTYGNPDLR WESTAQANIG YDLSLFKDRI GFTADVYRKS TYDLLLNADL PYTTGYETAF
KNIGKVRNEG LEFTLNTRNI DNKDFKWSSS FNISFNRSKV MALNAGQSFK TTPISWENSY
NATPLYIANV GQPIAQFYGY EFDGVYQYSD FNENSPGVFT LKDDVPNNGN ARNSIKPGDI
KYKDLDGNLV VDAKDRKVIG RGQPIHVGGF TNNFTYKNFD LSVFLQWSYG NDIYNANRML
FEGNMLDKKN LNQFASYADR WTPDNPSNTL YRVKGQGPAV YSSRVIEDGS FLRIKTVSLG
YNFSADVLKR IKLKSLRVSA SGQNLYTFTK YTGMDPEVSV RNSALTPGFD YSAYPRARAV
VFSLNTSF
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