| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0779 |
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| Symbol | |
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| ID | 8251868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 916332 |
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| End bp | 917360 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644934429 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003091063 |
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| Protein GI | 255530691 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.561354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGTC ATTATGTAAC AATAAAGGAT ATTGCAAAAA TTTTAAACAT CTCTGTTTCT
ACAGTGTCCA GGGCCTTAAG AGATACTTAT GATGTAAACC AGGAGACCAA GGAAAAAGTA
CTGGCACTGG CTGCAGAGTT GAACTACAAA CCCAATTTTA ATGCAACCGG GCTGGCCAAA
GGCAGCACGC ACAACCTAGG CGTAATTTTA CCTTTTATTA CCAATTATTA TTTTTCTACC
GTTATCACCG GCATCCAGGA GGTGGCTTAT AACAATGGAT ATAACATCAC GCTGTTCGTA
ACCAATGATT CACCGGAGCG GGAACTGGCT ATTATGGAAA ATCTTTCTGT TTCCAGTCTG
GATGGCTTGC TGGTTTCTAT TTCTTCCGAT TCCGACTCCT GTAACCATTT TCAGGAAATC
ATAGATGAAG GAGTACCAGT CGTGTTTTTT GACAGGGTAG CCAACGAAAT TGACACCTCA
AAAGTAATGC AGGACGATTA CAATGGTGCT TTTGAGGCAG TAGAACACCT GATCCTGAAC
GGATATACAA AAATAGCGCA TATTGCCGGC CCAAAAGGCA TGAGTTTTAC AGAAGCACGG
CTAAAAGGAT ATATAGATGC ATTGACCAAG CACCATTTAA GGATAAATGA AGATTGGATT
GTCTACTCCG GCTTTTCACA GGAATATGGT GAACAGGATA CCTATCAATT GCTGCAGCTG
AAACAACAGC CCGATGCCCT TTTCGCGGTA AATGATAGAA AAGCGATTGG TGCCATGATT
GCACTTAAAA ACAAAGGCAT AAAAGTTGGA GAAGAGTTTG GGGTAATTGG TTTTACCAAT
GACCCCATGT CTACCATCAT TTCTCCTGCG CTGTCAACCA TTGCAGAGCC AGCTTTCGAA
ATTGGCAAAT TAAGCTGCGA GCTGCTGATC AAACACATCA CCAAACCCAA ATACTTTCAT
GGCGAAGAAA TTGTTTTGCC AGGCAAGCTG ATTGTGAGGG AATCCAGTAT GAGAAAAGCT
AAACATTAA
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| Protein sequence | MARHYVTIKD IAKILNISVS TVSRALRDTY DVNQETKEKV LALAAELNYK PNFNATGLAK
GSTHNLGVIL PFITNYYFST VITGIQEVAY NNGYNITLFV TNDSPERELA IMENLSVSSL
DGLLVSISSD SDSCNHFQEI IDEGVPVVFF DRVANEIDTS KVMQDDYNGA FEAVEHLILN
GYTKIAHIAG PKGMSFTEAR LKGYIDALTK HHLRINEDWI VYSGFSQEYG EQDTYQLLQL
KQQPDALFAV NDRKAIGAMI ALKNKGIKVG EEFGVIGFTN DPMSTIISPA LSTIAEPAFE
IGKLSCELLI KHITKPKYFH GEEIVLPGKL IVRESSMRKA KH
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