Gene Phep_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0778 
Symbol 
ID8251867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp915148 
End bp916335 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content46% 
IMG OID644934428 
ProductN-acetylglucosamine-6-phosphate deacetylase 
Protein accessionYP_003091062 
Protein GI255530690 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1820] N-acetylglucosamine-6-phosphate deacetylase 
TIGRFAM ID[TIGR00221] N-acetylglucosamine-6-phosphate deacetylase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCATA AAAGGTTAAA AATATATAAC GGAAAACTGA TCACACCCTA TAAAACAATT 
CAGCAGGGAG TCCTGCTGAT TGAAGATGGA AAGATTGTGG GGCTGCAGGA AGGCAATGCA
GATTTTCCCG ACGCCCATGA AATTAATGCC AGGGGAAATT ATATTGCACC TGGTTTTATA
GACCTGCACA TCCATGGTGG TGGCGGGCAT GATTTTATGG ACAATACAGT GGAAGCTTTT
TTAGGCATTG CTGAAACACA TGCCCGCTAT GGAACTACGG CAATGTGCCC TACAACACTG
ACCAGCGAAA AGCAAGATCT GCTGGAAACC TTAAGGATAT ATGAAGAGGC TGCTCAATTA
AATGATAAAG GGGCACAATT TATAGGGATG CACCTGGAAG GCCCTTATTT TGCGCTGAGC
CAGCGAGGGG CACAGGATCC ACGTTATATA CGTGATCCAG ATCCGGCCGA GTATAAGGAA
ATACTGGCCG CTACCCGGGT GATTAAAAGG TGGAGCGCTG CACCTGAATT AAAAGGGGCT
ATTGAATTTG GCAAGTATTT AAAGACTAAG GGAGTACTTG CTGCGGTTGC TCATACGGAT
GCCATTTATG AAGAGGTGCT GGAAGCTTTT GAAAATGGCT ATACGCTGGC TACGCATTTC
TATTCCGGTA TGTCTGGCGT TACCCGACGG GAATGTTTCC GTTATGCAGG GGTAATTGAA
AGTGGTTACC TGATTGATGA AATGGATGTA GAGATCATTG CTGACGGCAT TCATTTGCCT
GCACCCTTGC TAAAGCTGAT CTATAAAATA AAGGGAGCAT CCCGTACGGC ACTGATTACA
GATGCAATGC GTGGAGCTGG AATGCCGGCA GGCGAAAGTA CCCTGGGCAG TTTAAAAAAC
GGATTGCCGG TGATTATAGA GGATGGGGTA GCCAAGCTGC CCGACAGAAG CTCTTTTGCC
GGTAGTGTAG CTACTGCCGA CAGGCTGGTC AGGAATATGA TCAATATGGC AAACGTTTCT
ATAGAAGAGG CGGTGAGGAT GATCACTAAA ACCCCGGCCA GGATTATGGG GATTGAAGAT
ATAAAAGGCT CACTTACTCC TGGGAAAGAT GCGGATGTGG TGATATTTGA TCAGCAAATC
AATATTCAGT ATACCATTGT AGGCGGGCGG GTGATTTACA GCCGTTAA
 
Protein sequence
MDHKRLKIYN GKLITPYKTI QQGVLLIEDG KIVGLQEGNA DFPDAHEINA RGNYIAPGFI 
DLHIHGGGGH DFMDNTVEAF LGIAETHARY GTTAMCPTTL TSEKQDLLET LRIYEEAAQL
NDKGAQFIGM HLEGPYFALS QRGAQDPRYI RDPDPAEYKE ILAATRVIKR WSAAPELKGA
IEFGKYLKTK GVLAAVAHTD AIYEEVLEAF ENGYTLATHF YSGMSGVTRR ECFRYAGVIE
SGYLIDEMDV EIIADGIHLP APLLKLIYKI KGASRTALIT DAMRGAGMPA GESTLGSLKN
GLPVIIEDGV AKLPDRSSFA GSVATADRLV RNMINMANVS IEEAVRMITK TPARIMGIED
IKGSLTPGKD ADVVIFDQQI NIQYTIVGGR VIYSR