Gene Phep_0769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0769 
Symbol 
ID8251858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp899057 
End bp899833 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content44% 
IMG OID644934419 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003091053 
Protein GI255530681 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAC CGACATTAAA ACCCTTAATC GCCTCATTAA TAATATTGTT TGTACTGGTC 
AGCTTTAAGA ACGAGCGGAA AAAGATAACC ATATATTCTA TCGGCGACTC TACCATGTGC
GATTTTGCCC CCAGTTACCT TTCACAATTT GGTGGCGACA ATTATCCCAT CAGGGGCTGG
ATGCAAATGA TGCCCGGTTT TTTTAATGAT CAAGTGCTGA TCCATAATGC GGCCCGCAGC
GGTAGGAGCT CTAAAAGCTT CAGGACCGAA GGTCATTGGA AACCGGTTAT AGACCAGGTA
AAAGCCGGTG ATTATGTATT CATTATGTTT GGCGGCAACG ACCAGAAACC CGATACTGCC
AGACATACAG ATCCGCAAAC CACCTATAGG CAAAACCTGC TGAATTATGT AAATGAAACA
AAGGCTAAAG GGGCATATCC CATTCTGTTT ACCTCACTGG TACGCAGAAG CTTTGGTAAA
GATGGCAAGC TGCGCGATAC TTACGGAGAT TATGTGACAG CGGTACGCAA CCTTGCCAAA
GAAATCAACG TCCCTTTGAT AGATATGTAT CAAAAATCGT GGGACCTTGT TGAAGGGTAT
GGTCCTGAGG AATCTAAAAA ACTATTCCTG TATATTGAAC CGGGAAAATT TACCAAACTG
CCTGAAGGTA AAAAAGACGA CAGCCATTTG TGTGTATTTG GTGCTACCGA AATGGCGCGT
CTTGCCGCAC AAGGGCTAAA AGAAATAAAA TCGCCGCTGG CCGGCTATCT GAAATAA
 
Protein sequence
MMKPTLKPLI ASLIILFVLV SFKNERKKIT IYSIGDSTMC DFAPSYLSQF GGDNYPIRGW 
MQMMPGFFND QVLIHNAARS GRSSKSFRTE GHWKPVIDQV KAGDYVFIMF GGNDQKPDTA
RHTDPQTTYR QNLLNYVNET KAKGAYPILF TSLVRRSFGK DGKLRDTYGD YVTAVRNLAK
EINVPLIDMY QKSWDLVEGY GPEESKKLFL YIEPGKFTKL PEGKKDDSHL CVFGATEMAR
LAAQGLKEIK SPLAGYLK