Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0761 |
Symbol | |
ID | 8251850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 886792 |
End bp | 889497 |
Gene Length | 2706 bp |
Protein Length | 901 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644934411 |
Product | alpha-1,2-mannosidase |
Protein accession | YP_003091045 |
Protein GI | 255530673 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3537] Putative alpha-1,2-mannosidase |
TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAGAA AATTCCTACA ACGGGCCATT TGCCCTGCAG TCTTATTTTT AATTAGTTTT ACTGCTGTGG CAGGTACAGA TAATATTGCT CCGCTGGCCA GCATTTCTGC TTCCTCAGTG CTGAATGCCA GCTTCAGCGC AAATCATGTT AAGGATGGCC TCACCGGCAT TGAAAATAAA GGTGAATGGG CTTGTGAAGG TGTAACAACA GATTGGGGGT ATGTGCGTTT CCCATGGATC AGGCTAGACT GGGATAAAAA TTATACCATT GACAGGATAG TGCTGTACGA CCGGCCTTCA TTGAGTGAAC ACATTGCAAG CGGCCGGCTG GAGTTTAGCG ATGGCACAGT AGTATGGGTA AACCAGATCC CCAATAACGG AACCGCCAGG TTGGTACAGT TTAGTCCCAG AGCCGTATCC TGGGTAAAAT TTGTCGTAAC CGATGGCAAG GGCAAAGACC TGGGTTTTTC TGAAATAGAA GTGTTTACGG CCAGAACCGC GCAAAGCGAT TATGTAAGCT GGGTTGATCC TTATATAGAA ACGAACAGGG GGCGGTATTT TTATTTCATA ACCGGATCCA GGCCGTTTGG AATGGTAGGT GCTGCCCCGC ATACCCGCAA TAAAAACCAG AATGGCGGGG GTTACAATTA TAACGAAAAT GAGATCCTGG GTTTCGGGCA GATCCATACC TGGATGATCT CAGGTATTGA AGTGATGCCG GCATCAGAAG CAGTTGATCC GCGGGGCGGG GAACAGACCT GGAAATCGGA ATTTAGCCAT GATGACGAGA TTGTCCAGCC CGGATATCAG CGGGTATACC TGCGTACACC CAAAACCTGG GTGGAGCTGA CAAGTACAGA AAGGGTTTCT TTTTACCGGT TTAAATATAC GCAGGATATG CAGGCCCAGG TTTTGGTAAA TCTGGGTGGT TATATGGGCA ACAGTACTAT GGCCGATGCC GAACTGAAAA AGATCAATAA CCGGGAGTTT CGGGGTTCTT TCAGTTCTGT AAAAAGGTAT TGGGGCGGCC CAAAGGATGT CAAAGTTTTT TTTGTGGTAC AGTTTAACCG TGATGTGGAT GCACTGGATG GCTGGAAGGG GAAAGACCTG TTGAAGAATA TAGCTGCTTT ACAGGGCGAT GAGGCAGGTG TGAGTGCAAA ATATAACGTA AAGGCGGGCG ATGAAATTAA AATGAAGGTT GCCCTATCCT ATACCAATAT AGCCAATGCC CGGAAAAACA TGGATACAGA ATGCCCGGGC TGGGATTTTG ATGCAGTGCG GCAGGATTCG AGAAAGGTAT GGAACGAATG GCTGGGTAAA ATTGAGGTGG AAGGTGGCGC CCAGGATCAG AAAATCAAGT TCTATACAGA TTTATGGCAT GTTTTGCTGG GCCGCCAAAA GCTTGATGAT GTATCCGGTG ATTATCCCGA CCGCACTACC GGTAAGCGGG AAGGCAATTT TACCGATGCC ATTTTTAAAG TAAAAACCTT GCCTAAAACT AAAGAAGGCA AGGTAAAATA CCATATGTAC AATTCGGATG CTTTCTGGCT AAGCCAATGG AACCTGAATA TTTTATGGGG GCTGGGTTGG CCTGAAGTAC AGGATGAACT GTCGGCCTCT ATGATCCAGT ATGCGGATAA TGGAGGTTTG CTGCCCCGAG GGCCTTCCGG TGGGGGTTAT TCATACATCA TGACCAGTAA CCCGACGGCC AACCTGGTGG CAGGAACCTA TCAGAAAGGG TTACTGACAA AAGTGGATGC CAGGCATGCT TTTGATGTTT TAAAACGCAA CCAGATGCCA GGCGGAATGC TGGGCAGCAA TACTGATGTT GAATTTTACA TTAAGAACGG CTGGTGGAAA AACAATGCGG GAATTACCAT TGAGGCTGCA TTTCAGGACT GGGCAGTTGC GCAGATGGCG AAGAAGCTGG GCCGCAAAAC CGATTACAAT TATTTCTTAA AACGTTCTGA AAGCTGGAAA AACTGTTTTA ACCCTGCACA GAACCTCTTG TTTCCTAAGG ATAGCCTTGG GCATTTTACA AGTAATGATC CTTTAAGTGG CGCCGGTTTT ATAGAGGCAA ATGCCTGGCA GGCTACCTGG GGTGTATCAC ATGACATTCC CGGCCTGGCA AAACTAATGG GTGGCAATGA CAGTTTGTGT AATAAGCTGA ATTACGCTTT TGAAAAAGCA GCCCCCCAGG ATTTTGTTTT TGCCTATAAC GATGGTTATG TAAGTTATGC CAACCAGCCT GGTCTTTCCA ATGCGCATGT GTTTAACTAT GCGGGTAAGC CGTGGTTAAC ACAATACTGG GTACGCAGAG TAAGAGAGCA GGCTTATGGA GGTACCAGTC CGGATCTGGG CTATGGCGGA CATGATGAGG ACCAGGGACA AATGGGGGCA CTGAGTGCGC TGATGGCTAT AGGTCTGTTC AATCTGCAGG GCAATGCAGC AGTTGCGCCT GTTTATGAAA TCACCAGTCC AATTTTTGAC AGGATAAGGA TCAGCCTCGA CCCCAGGTAT TATACCGGAA AAGAATTTGA CATCATTACC TATAACAATT CCAGAGAAAA CAGGTATATC CAGAAAGCAA CACTAAATGG TAAGGCGCTG AACCGTTTTT GGTTTAGCCA TGCCGATTTT GCAAAGGGAG GTAAGCTTGA AATCTGGCTT GGGCAGGAGC CCAATAAAGA ATGGGGGACT AAATGA
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Protein sequence | MLRKFLQRAI CPAVLFLISF TAVAGTDNIA PLASISASSV LNASFSANHV KDGLTGIENK GEWACEGVTT DWGYVRFPWI RLDWDKNYTI DRIVLYDRPS LSEHIASGRL EFSDGTVVWV NQIPNNGTAR LVQFSPRAVS WVKFVVTDGK GKDLGFSEIE VFTARTAQSD YVSWVDPYIE TNRGRYFYFI TGSRPFGMVG AAPHTRNKNQ NGGGYNYNEN EILGFGQIHT WMISGIEVMP ASEAVDPRGG EQTWKSEFSH DDEIVQPGYQ RVYLRTPKTW VELTSTERVS FYRFKYTQDM QAQVLVNLGG YMGNSTMADA ELKKINNREF RGSFSSVKRY WGGPKDVKVF FVVQFNRDVD ALDGWKGKDL LKNIAALQGD EAGVSAKYNV KAGDEIKMKV ALSYTNIANA RKNMDTECPG WDFDAVRQDS RKVWNEWLGK IEVEGGAQDQ KIKFYTDLWH VLLGRQKLDD VSGDYPDRTT GKREGNFTDA IFKVKTLPKT KEGKVKYHMY NSDAFWLSQW NLNILWGLGW PEVQDELSAS MIQYADNGGL LPRGPSGGGY SYIMTSNPTA NLVAGTYQKG LLTKVDARHA FDVLKRNQMP GGMLGSNTDV EFYIKNGWWK NNAGITIEAA FQDWAVAQMA KKLGRKTDYN YFLKRSESWK NCFNPAQNLL FPKDSLGHFT SNDPLSGAGF IEANAWQATW GVSHDIPGLA KLMGGNDSLC NKLNYAFEKA APQDFVFAYN DGYVSYANQP GLSNAHVFNY AGKPWLTQYW VRRVREQAYG GTSPDLGYGG HDEDQGQMGA LSALMAIGLF NLQGNAAVAP VYEITSPIFD RIRISLDPRY YTGKEFDIIT YNNSRENRYI QKATLNGKAL NRFWFSHADF AKGGKLEIWL GQEPNKEWGT K
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