Gene Phep_0761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0761 
Symbol 
ID8251850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp886792 
End bp889497 
Gene Length2706 bp 
Protein Length901 aa 
Translation table11 
GC content47% 
IMG OID644934411 
Productalpha-1,2-mannosidase 
Protein accessionYP_003091045 
Protein GI255530673 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3537] Putative alpha-1,2-mannosidase 
TIGRFAM ID[TIGR01180] alpha-1,2-mannosidase, putative 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGAA AATTCCTACA ACGGGCCATT TGCCCTGCAG TCTTATTTTT AATTAGTTTT 
ACTGCTGTGG CAGGTACAGA TAATATTGCT CCGCTGGCCA GCATTTCTGC TTCCTCAGTG
CTGAATGCCA GCTTCAGCGC AAATCATGTT AAGGATGGCC TCACCGGCAT TGAAAATAAA
GGTGAATGGG CTTGTGAAGG TGTAACAACA GATTGGGGGT ATGTGCGTTT CCCATGGATC
AGGCTAGACT GGGATAAAAA TTATACCATT GACAGGATAG TGCTGTACGA CCGGCCTTCA
TTGAGTGAAC ACATTGCAAG CGGCCGGCTG GAGTTTAGCG ATGGCACAGT AGTATGGGTA
AACCAGATCC CCAATAACGG AACCGCCAGG TTGGTACAGT TTAGTCCCAG AGCCGTATCC
TGGGTAAAAT TTGTCGTAAC CGATGGCAAG GGCAAAGACC TGGGTTTTTC TGAAATAGAA
GTGTTTACGG CCAGAACCGC GCAAAGCGAT TATGTAAGCT GGGTTGATCC TTATATAGAA
ACGAACAGGG GGCGGTATTT TTATTTCATA ACCGGATCCA GGCCGTTTGG AATGGTAGGT
GCTGCCCCGC ATACCCGCAA TAAAAACCAG AATGGCGGGG GTTACAATTA TAACGAAAAT
GAGATCCTGG GTTTCGGGCA GATCCATACC TGGATGATCT CAGGTATTGA AGTGATGCCG
GCATCAGAAG CAGTTGATCC GCGGGGCGGG GAACAGACCT GGAAATCGGA ATTTAGCCAT
GATGACGAGA TTGTCCAGCC CGGATATCAG CGGGTATACC TGCGTACACC CAAAACCTGG
GTGGAGCTGA CAAGTACAGA AAGGGTTTCT TTTTACCGGT TTAAATATAC GCAGGATATG
CAGGCCCAGG TTTTGGTAAA TCTGGGTGGT TATATGGGCA ACAGTACTAT GGCCGATGCC
GAACTGAAAA AGATCAATAA CCGGGAGTTT CGGGGTTCTT TCAGTTCTGT AAAAAGGTAT
TGGGGCGGCC CAAAGGATGT CAAAGTTTTT TTTGTGGTAC AGTTTAACCG TGATGTGGAT
GCACTGGATG GCTGGAAGGG GAAAGACCTG TTGAAGAATA TAGCTGCTTT ACAGGGCGAT
GAGGCAGGTG TGAGTGCAAA ATATAACGTA AAGGCGGGCG ATGAAATTAA AATGAAGGTT
GCCCTATCCT ATACCAATAT AGCCAATGCC CGGAAAAACA TGGATACAGA ATGCCCGGGC
TGGGATTTTG ATGCAGTGCG GCAGGATTCG AGAAAGGTAT GGAACGAATG GCTGGGTAAA
ATTGAGGTGG AAGGTGGCGC CCAGGATCAG AAAATCAAGT TCTATACAGA TTTATGGCAT
GTTTTGCTGG GCCGCCAAAA GCTTGATGAT GTATCCGGTG ATTATCCCGA CCGCACTACC
GGTAAGCGGG AAGGCAATTT TACCGATGCC ATTTTTAAAG TAAAAACCTT GCCTAAAACT
AAAGAAGGCA AGGTAAAATA CCATATGTAC AATTCGGATG CTTTCTGGCT AAGCCAATGG
AACCTGAATA TTTTATGGGG GCTGGGTTGG CCTGAAGTAC AGGATGAACT GTCGGCCTCT
ATGATCCAGT ATGCGGATAA TGGAGGTTTG CTGCCCCGAG GGCCTTCCGG TGGGGGTTAT
TCATACATCA TGACCAGTAA CCCGACGGCC AACCTGGTGG CAGGAACCTA TCAGAAAGGG
TTACTGACAA AAGTGGATGC CAGGCATGCT TTTGATGTTT TAAAACGCAA CCAGATGCCA
GGCGGAATGC TGGGCAGCAA TACTGATGTT GAATTTTACA TTAAGAACGG CTGGTGGAAA
AACAATGCGG GAATTACCAT TGAGGCTGCA TTTCAGGACT GGGCAGTTGC GCAGATGGCG
AAGAAGCTGG GCCGCAAAAC CGATTACAAT TATTTCTTAA AACGTTCTGA AAGCTGGAAA
AACTGTTTTA ACCCTGCACA GAACCTCTTG TTTCCTAAGG ATAGCCTTGG GCATTTTACA
AGTAATGATC CTTTAAGTGG CGCCGGTTTT ATAGAGGCAA ATGCCTGGCA GGCTACCTGG
GGTGTATCAC ATGACATTCC CGGCCTGGCA AAACTAATGG GTGGCAATGA CAGTTTGTGT
AATAAGCTGA ATTACGCTTT TGAAAAAGCA GCCCCCCAGG ATTTTGTTTT TGCCTATAAC
GATGGTTATG TAAGTTATGC CAACCAGCCT GGTCTTTCCA ATGCGCATGT GTTTAACTAT
GCGGGTAAGC CGTGGTTAAC ACAATACTGG GTACGCAGAG TAAGAGAGCA GGCTTATGGA
GGTACCAGTC CGGATCTGGG CTATGGCGGA CATGATGAGG ACCAGGGACA AATGGGGGCA
CTGAGTGCGC TGATGGCTAT AGGTCTGTTC AATCTGCAGG GCAATGCAGC AGTTGCGCCT
GTTTATGAAA TCACCAGTCC AATTTTTGAC AGGATAAGGA TCAGCCTCGA CCCCAGGTAT
TATACCGGAA AAGAATTTGA CATCATTACC TATAACAATT CCAGAGAAAA CAGGTATATC
CAGAAAGCAA CACTAAATGG TAAGGCGCTG AACCGTTTTT GGTTTAGCCA TGCCGATTTT
GCAAAGGGAG GTAAGCTTGA AATCTGGCTT GGGCAGGAGC CCAATAAAGA ATGGGGGACT
AAATGA
 
Protein sequence
MLRKFLQRAI CPAVLFLISF TAVAGTDNIA PLASISASSV LNASFSANHV KDGLTGIENK 
GEWACEGVTT DWGYVRFPWI RLDWDKNYTI DRIVLYDRPS LSEHIASGRL EFSDGTVVWV
NQIPNNGTAR LVQFSPRAVS WVKFVVTDGK GKDLGFSEIE VFTARTAQSD YVSWVDPYIE
TNRGRYFYFI TGSRPFGMVG AAPHTRNKNQ NGGGYNYNEN EILGFGQIHT WMISGIEVMP
ASEAVDPRGG EQTWKSEFSH DDEIVQPGYQ RVYLRTPKTW VELTSTERVS FYRFKYTQDM
QAQVLVNLGG YMGNSTMADA ELKKINNREF RGSFSSVKRY WGGPKDVKVF FVVQFNRDVD
ALDGWKGKDL LKNIAALQGD EAGVSAKYNV KAGDEIKMKV ALSYTNIANA RKNMDTECPG
WDFDAVRQDS RKVWNEWLGK IEVEGGAQDQ KIKFYTDLWH VLLGRQKLDD VSGDYPDRTT
GKREGNFTDA IFKVKTLPKT KEGKVKYHMY NSDAFWLSQW NLNILWGLGW PEVQDELSAS
MIQYADNGGL LPRGPSGGGY SYIMTSNPTA NLVAGTYQKG LLTKVDARHA FDVLKRNQMP
GGMLGSNTDV EFYIKNGWWK NNAGITIEAA FQDWAVAQMA KKLGRKTDYN YFLKRSESWK
NCFNPAQNLL FPKDSLGHFT SNDPLSGAGF IEANAWQATW GVSHDIPGLA KLMGGNDSLC
NKLNYAFEKA APQDFVFAYN DGYVSYANQP GLSNAHVFNY AGKPWLTQYW VRRVREQAYG
GTSPDLGYGG HDEDQGQMGA LSALMAIGLF NLQGNAAVAP VYEITSPIFD RIRISLDPRY
YTGKEFDIIT YNNSRENRYI QKATLNGKAL NRFWFSHADF AKGGKLEIWL GQEPNKEWGT
K