Gene Phep_0747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0747 
Symbol 
ID8251835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp867655 
End bp868932 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content46% 
IMG OID644934396 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_003091031 
Protein GI255530659 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.556917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTCAC AAATCCTGTT TATTGTCATT ACATTGGCTG CCATCGCCTT GTTCAGTTAT 
AACTTAAAAA AAGTTATCCG TAACATCCGG CTTGGAAGAG CTGCCAATCG CTCCGATCAG
CCACAAAAAA GAATGATGAC CATGCTCAAA GTAGCATTTG GGCAAACAAA AATGTTTTTC
CGGCCTATCC CGGCCTTCCT GCACCTCATT GTCTATGCTG GCTTTGTCAT CATTAATATC
GAGGTACTGG AAATTATGAT AGATGGTATT TTTGGCACCC ACCGCATATT TGGTGGCCTG
GGCACCCTAT ACAATATACT CATCGGTTCA TTTGAATTCC TGGCCCTTGG CGTATGGCTG
GCCTGCGCCA TCTTTTTAAT CCGCAGAAAC GTCCTTAAAT TAAAAAGGTT CAGTGGTGTA
GAAATGAAAA GCTGGCCCAG ATCGGATGCC AATTACATCC TGATCACAGA AATCCTACTC
ATGACCGCCT TTTTAACCAT GAATGCAGCT GACGCAAAAT TACAGGCTAT GGGCCTTGGA
CATTATACGG CCGCTGGTGC ATTTCCGGTA AGCCAGTTCC TGCAAAACCT TTTACCCGAT
ACGGCGGCAG GCTTAATTGC TATAGAAAGG GGCTGCTGGT GGTTCCACAT TATTGGCATA
TTTGCCTTTT TAAACTATCT GCCCTATTCC AAACACTTCC ACATCATCTT TGCTTTTCCA
AACACTTATT TCTCCAACCT GGAACCTAAA GGTGAATTTA CAAATATGGA AAGTGTAACC
AATGAGGTAA AGGCTATGCT GGACCCATCA TTTACACCGC CAGAGGCTGC TCCGGGCCGC
TTTGGTGCTA AAGATGTAAA CGACCTGACC TGGGTTAACC TGATGAATGC CTATACCTGC
ACCGAATGCG GAAGGTGTAC CTCTGTTTGC CCTGCAAACA TCACCGGCAA ACTGCTTTCA
CCCCGAAAGA TCATGATGGA TACCCGCGAC AGAATGGAAG AAGTTGGAAA GAATGGACTT
GAGGATGGCA AATCGCTGAT CGATACTTAC ATTACCCGTG AAGAGATCTG GGCCTGTACC
AGTTGCAACG CCTGTACACA GGCCTGCCCT ATCAATATAG ACCCACTGTC CATCATCACC
GAACTGAGAA GGTATGCGGT GATGGAAGAA TCCCAATCGC CCGCCAGCAT CAATACCATG
CTCGGCAATA TAGAAAACAA TGGGGCACCC TGGAAATATT CACCGTCCGA CAGGTTCAAC
TGGGCAAAAG AGAGTTAA
 
Protein sequence
MVSQILFIVI TLAAIALFSY NLKKVIRNIR LGRAANRSDQ PQKRMMTMLK VAFGQTKMFF 
RPIPAFLHLI VYAGFVIINI EVLEIMIDGI FGTHRIFGGL GTLYNILIGS FEFLALGVWL
ACAIFLIRRN VLKLKRFSGV EMKSWPRSDA NYILITEILL MTAFLTMNAA DAKLQAMGLG
HYTAAGAFPV SQFLQNLLPD TAAGLIAIER GCWWFHIIGI FAFLNYLPYS KHFHIIFAFP
NTYFSNLEPK GEFTNMESVT NEVKAMLDPS FTPPEAAPGR FGAKDVNDLT WVNLMNAYTC
TECGRCTSVC PANITGKLLS PRKIMMDTRD RMEEVGKNGL EDGKSLIDTY ITREEIWACT
SCNACTQACP INIDPLSIIT ELRRYAVMEE SQSPASINTM LGNIENNGAP WKYSPSDRFN
WAKES