Gene Phep_0745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0745 
Symbol 
ID8251833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp866035 
End bp866832 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content47% 
IMG OID644934394 
Productbeta-lactamase domain protein 
Protein accessionYP_003091029 
Protein GI255530657 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.294685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGTA AACACCTCTT TATTGCCTCC TTAAATTCCG GAAGTAACGG TAACTGCTAC 
TATGTGGGTA ACGAAAGGGA AGCCATATTG GTGGATGTCG GTATTTCATG CCGGGAAACT
GAAAAGAGAA TGTTCCGGCT GGGCTTATCT ATGCAAAAGG TAAAAGCCAT ATTCATTTCC
CACGAACATA CCGACCACGT TAAAGGTCTT TGTACCCTGG CCGCGAAATA TAACTTGCCT
GTTTACATCA GCCCTGGTAC CCTTTCCGGC TGCCGCTTCA ACCTTAGAGA AGAGCTCATC
AACTATTTAA ACAACAACGA GACCATTCAG ATAGGCAGCC TTACGGTTAC AGGATTCCTT
AAAATACACG ATGCCTCAGA GCCCTACAGC TTTGTGGTGG CCTGCGGGGA AACCAAAGTT
GGTGTATTTA CAGATATCGG AGAAGCCTGC GACCAGCTCA TATTTCATTT CAGACAATGT
CATGCAGCTT TCCTCGAAGC CAATTATGAC GATGCCCTGC TGGAAAAAAG TGCTTACCCT
TATTTCCTTA AAAAGCGCAT CAGCGGGGGC AAGGGCCACT TATCCAATAA AAAAGCACTT
GATCTTTTCA GCAGCCATAG GCCTGCTTTC ATGACGCACC TGCTGCTCGC CCACTTGTCT
AAAGACAACA ACTGCCCCGA TCTGGCCCTG GAGCTGTTCC GGCAACAGGC CAATGGCACC
GAAATCATCG TGGCCTCCAG GTATGAAGAA ACCCAGGTGT ATACTATTTT TGAGCCAGCA
GCTGCGCATT CATTTTAA
 
Protein sequence
MDCKHLFIAS LNSGSNGNCY YVGNEREAIL VDVGISCRET EKRMFRLGLS MQKVKAIFIS 
HEHTDHVKGL CTLAAKYNLP VYISPGTLSG CRFNLREELI NYLNNNETIQ IGSLTVTGFL
KIHDASEPYS FVVACGETKV GVFTDIGEAC DQLIFHFRQC HAAFLEANYD DALLEKSAYP
YFLKKRISGG KGHLSNKKAL DLFSSHRPAF MTHLLLAHLS KDNNCPDLAL ELFRQQANGT
EIIVASRYEE TQVYTIFEPA AAHSF