| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0734 |
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| Symbol | |
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| ID | 8251822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 856671 |
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| End bp | 858890 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644934383 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_003091018 |
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| Protein GI | 255530646 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.373091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACA CATCAAAAAT TATCTATACC AAAACAGATG AAGCGCCAAT GTTGGCAACC
TATTCACTTT TACCGATTGT ACAGGCTTTT ACCGCCTCTG CAGGCATTGA TGTAGAAACC
AGGGACATTT CTCTGGCCGG AAGAATTTTG GCGAACTTTC CTGAGTTTTT AAAGGAAGAC
CAAAAAGTTG GAGATGCATT GACTGAACTG GGGCAGCTGG CCACCACACC GGAGGCCAAT
ATCATTAAAC TGCCAAACAT TTCAGCTTCT ATTCCACAGC TTACGGATGC AATTGCCGAA
TTACAGTCAC AGGGATTTGC CATTCCAAAC TATCCGGATA ATGCACAAAC TGAAGAAGAG
AAAGCGATAA AGACAAAGTA TGCAAAAGTA TTAGGTTCCG CGGTTAACCC TGTTTTGCGT
GAGGGTAACT CTGACCGCAG GGCACCTAAA GCAGTTAAAA ATTATGCAAA GGCCAATCCA
CATTCGATGG GTGCCTGGTC TGCCGATTCT AAAACAAGGG TAGCCAGCAT GAGTGAAGGT
GATTTTTACG GATCTGAGAA ATCGGTTACT GTAGCAGAGG CTACGCAGTT TAAGATCGAA
TTTGTTGGTG CCGATGGCAC TGTAACGGAA TTAAAAGGGC TGTCGCCTTT AAAAGCAGGA
GAAGTGATCG ACAGTTCTGC ACTGAGCTTA TCGGCCTTAA AATCATTTGT AGCCAAAACC
ATAGAAGAGG CCAAAGCAGC CGGGGTTTTA CTTTCAGCAC ATTTAAAAGC AACGATGATG
AAGGTTTCTG ACCCGATCAT TTTTGGTGCG ATAGTAGAAG TTTATTTTGC AGCAGTTTTT
GCCAAATATG CCGAGCTGTT TGCCAGTCTG AACATAGATA CCCGTAACGG ATTGGGTGAT
GTGTATGCTA AAATTGCAGG AAATGCAAGG GAAGCAGAAG TAAAAGTAGA CATTGAGGCG
GCTATTGCAA ACGGGCCTGC ACTGGCGATG GTAAATTCTG ATAAAGGCAT TACCAACCTG
CATGTACCTT CTGATGTGAT TGTTGATGCT TCTATGCCGG CAATGATCCG CACATCTGGT
CAGATGTGGA ACAAGGACAA CAAACAGCAG GATACGATTG CGATTATTCC TGACCGTTGT
TATGCCGGTG TGTATACGGC TACCATAGAC GACTGTAAGG CACATGGTGC TTTTGACGTA
ACCACCATGG GTTCTGTTCC GAATGTTGGT CTGATGGCAC AGAAAGCAGA AGAATACGGT
TCTCACGATA AAACTTTTCA GGCGGCTGCC AATGGCACTA TTCGTGTAAC GGATGCCGAT
GGTAAAGTTT TCTTTGACCA GAAAGTTGAA AAAGGCGATA TTTTCCGCAT GTGCCAGACC
AAGGATGCAC CGATCCAGGA CTGGGTTAAA CTGGCCGTAA ACAGGGCCCG TTTATCGGCT
ACGCCGGCTG TTTTCTGGTT GGACGGGAAC AGGGCGCACG ACAGGGAGAT TATTGCGAAA
GTGAAAAAAT ACCTGGCAGA TCACGATACT TCAGGTTTGG ATATCCGTAT TTTATCGCCT
GTTGAGGCTA CTAAATTTAC TTTGGAAAGG ATCCGTAAAG GAGAAGATAC CATTTCGGTA
ACTGGTAACG TATTGCGTGA TTATCTGACC GATCTTTTCC CGATCCTGGA ATTGGGTACT
TCGGCAAAAA TGTTGTCTAT TGTTCCTTTG ATGAATGGCG GTGGTTTGTT TGAAACCGGA
GCTGGAGGTT CGGCACCAAA ACATATTGAG CAGTTTATCC ATGAAGGATA TTTGCGCTGG
GATTCATTGG GTGAGTTCCT GGCACTGGCG GTATCATTGG AACACCTGGG CCAAACGCAG
CACAATGCGA AAGCATTGGT GCTGGCCGAA ACTTTAGATG CTGCAACAGA GAAATTCCTG
GCCAATGATA AATCGCCCGC ACGTAAAGTA GGGCAGATTG ACAACAGGGG CTCACATTTT
TATCTGGCTT TGTATTGGGC ACAAAACCTT GCTGCACAGA CCAAAGATGC CGATTTGCAG
GCCAGGTTTA CTGAACTGGC TAAGGTGCTG ACTGAAAACG AAGCGAAAAT TTCGGCTGAA
CTGATTGCTG CACAAGGCAA ACCGCAGAAC ATTGGGGGTT ACTATCACCC GGATGACCAG
CTGGCCGCTG CTGCAATGCG CCCTAGTGAA ACCTTAAATA CTGCTTTGGC GGGATTGTAG
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| Protein sequence | MSDTSKIIYT KTDEAPMLAT YSLLPIVQAF TASAGIDVET RDISLAGRIL ANFPEFLKED
QKVGDALTEL GQLATTPEAN IIKLPNISAS IPQLTDAIAE LQSQGFAIPN YPDNAQTEEE
KAIKTKYAKV LGSAVNPVLR EGNSDRRAPK AVKNYAKANP HSMGAWSADS KTRVASMSEG
DFYGSEKSVT VAEATQFKIE FVGADGTVTE LKGLSPLKAG EVIDSSALSL SALKSFVAKT
IEEAKAAGVL LSAHLKATMM KVSDPIIFGA IVEVYFAAVF AKYAELFASL NIDTRNGLGD
VYAKIAGNAR EAEVKVDIEA AIANGPALAM VNSDKGITNL HVPSDVIVDA SMPAMIRTSG
QMWNKDNKQQ DTIAIIPDRC YAGVYTATID DCKAHGAFDV TTMGSVPNVG LMAQKAEEYG
SHDKTFQAAA NGTIRVTDAD GKVFFDQKVE KGDIFRMCQT KDAPIQDWVK LAVNRARLSA
TPAVFWLDGN RAHDREIIAK VKKYLADHDT SGLDIRILSP VEATKFTLER IRKGEDTISV
TGNVLRDYLT DLFPILELGT SAKMLSIVPL MNGGGLFETG AGGSAPKHIE QFIHEGYLRW
DSLGEFLALA VSLEHLGQTQ HNAKALVLAE TLDAATEKFL ANDKSPARKV GQIDNRGSHF
YLALYWAQNL AAQTKDADLQ ARFTELAKVL TENEAKISAE LIAAQGKPQN IGGYYHPDDQ
LAAAAMRPSE TLNTALAGL
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