Gene Phep_0727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0727 
Symbol 
ID8251815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp843968 
End bp846556 
Gene Length2589 bp 
Protein Length862 aa 
Translation table11 
GC content46% 
IMG OID644934376 
Producthypothetical protein 
Protein accessionYP_003091011 
Protein GI255530639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA CCTATTTATT GCTCCTGTCT GCGCTACTAT GTTTTAGCCT TCAGGATACA 
AAGGGGCAGG CGGGTAAAAA GAAGACCGAT ACGGCCGGCT TTACCAAAGC CCCTGCCGAT
GCCATTAAAT CCTTTCAGGC ATTTTTTAAG GATGGGGTAG CTTCTGATAC CGGGCTTTTT
ATAAGCCATC GTGCCCAAAA CACATACTTT TTCGAGATTC CCGACAGCCT GTTAAAAAGA
GATATGCTGA TGGTAGCCAC CAGGATTTCT ATGAGCAGCA GCGATTTTGA AAACATGGTT
GCCGGAGAAA GGGCCCAGCC CGGAATGATG CTGCAATGGG ACAAGTCACC AGATGGCCGG
TTTATTTTCC TGCGGAAAGT GACCTCAAGA CTGGCCATCC GCTTTTCGGG TGCCGACAGT
GCCTTCCGTA ATGCAGTGAA CCTACAGACG CTCGATCCGA TTATCATGTC CTTCCCGGTT
AAGGCCAGGG GCAAACAAGG CAAAAATGCC ATTATCGATA TACAGCAACT CTTCCTGGCC
GATGTAAAAG AGATCAGCCC CTTCGCACAA AACCCGATCC AAAAAGCAAT GGGAGTACCC
GATAAAAAGT ATAAGGTAGA AACGGACCGC TCCTATATCG CCTCTGTGCA AAGTTTTGAG
AAAAATATAG AGGTGCGCAG TATGATCACT TTTACCAATG CTGAAGACGT ATATACCCTG
CTCATTAACC GCTCTATGGT ACTGTTGCCC AAAAAACCGA TGATGGGCAG GTATGCCGAT
GACAGGGTGG GTTATTTTAC CAAATCCTTC AGTGATTTTA ACGAAAGTGA ACCGGTGAAA
GATAAAGCCT TCATCAACCG TTGGCGATTG GAACCTAAGG AAGAGGATAA AGCTAAAATG
GCGCAGGGTC TGTTGGTAGA ACCCCAAAAC CCGATCGTAT TTTACCTGGA TGCCGCTACC
CCGAAAAAAT GGAAGGAATA TATCCGCAAA GGTGTAGAGG ATTGGAAAAC AGCCTTTGAA
TCCGCAGGCT TTAAAAATGC CATCATTGCT AGAGATCTAC CTGTAAATGA CCCCTTGTTT
AATGCCGAGG ACATTCGTTA TTCAGTAATC CGTTACACTG CATCGGCCAT CCCCAATGCC
AAAGGCCCTT CAGTTATTGA TCCCCGTTCG GGCGAAATCC TGGAATCCGA TGTGATCATT
TACCACAATA TCCTGCAGTT GCTTACTCAA TGGCGTTTTG CACAAACGGC GGCCAACGAC
CCTTCCGTAC GTTCGGGAAA ATTAACCGAT GATGCCATGG GCGAGGCCAT CCGTTATGTG
GCCGCACATG AAGTAGGTCA TGCCCTGGGT TTAAGACATA ACATGGGTGC TTCCTACGCT
TTTCCAGTCG ATTCTTTACG CTCGGCCAGC TTTACCCAAA AGTATGGCAC CACACCTTCC
ATAATGGATT ATGCCCGTAA CAACTATGTG GCGCAGCCTG AAGATAAGGG TGTAAAATTA
ACGCCTCCTT TATTGGGTAT TTACGATCAA TATGCCATCA ACTGGGGTTA CAGGCCAATT
GCTGAAGCCC AATCGCCAGG TGAAGAACTC AAAACATTGA ACAGCTGGAT TGCCAGGCAT
CAGGGCGACC CGCGCTATCG CTTTGCTGAA GGTGACCTGA ATGGAAGTGA TCCCTCGTCG
CAAAGGGAAA GTCTGGGCGA TGATGTGGTC AAAGCTAGCA GATACGGGGT GAAAAACATC
CGCTATATCC TGCTCAACAT GAAAAAATGG ATGACAGTGC CTGGTGCAAA ATATGATGAG
TTGGATGATG CTTATCTGGC TGTATTGAGG CAATATGAAA GGTATTTAGG CCATGTTGGA
ACTGCCATAG CTGGTGTTTA CCAGAATTAT CCGGTGCAGG GACAGCAGCA GCTAGCTTAT
CAGTATTCCT CAAAAAAGGA GAATAAAGCC GCAGTGGCCT TCATGCTGGA ACAGTACCAC
AATTTTCCTT TGTTGCTGGA AAGTCTGCCT AAAGACATGA TCATTTACGA TAAGGCCGGG
GGTGCGAAAA GGGAAGTGCC TGTAAGTACG TATATAGAAA GGCTGTTCAA AAAACAATTT
CAGGCTGAAG TGCTTAATTT TGGTAAGCTG GCCTTTTTAA CAGATAACGG GTTGCAGGAT
GGGGATGCTG CTTATCAGGC CACAGATTTG CTGAATGACA TCCGTAACGA CCTGTTCAGC
GCGGAACGGG CTGTACCTAA ATACTACGAT CAGTTGCTGC AGGCCCTGTA CCTGGACCGG
GTTATCGGAC TTTCAAGTTT AAACAAAACG AATGTGGGTA CAAAGGCCTT TGCTGAGGCA
GCAATAGCTA GAGTTCCTGA AAGCGCTTGC TTTGACTTGG ACGATCTGGT ACTCCCTTCT
TCCAAGGAGC TTTATTTTCA GTTCATGAGC ATGGCTGTAA ATGATAAACA GTTTAAAATT
GAAAGTCTGG CACTTGGCGA GATCAAAAGG ATTAAGGCCA TTGTAGAGCA ACGGATACCC
GGAGCAAAAG CTGAAGTTCT AGATCACTAT CAATACCTGC TTAAAAGGAT CCAGTTGTTC
CTGAAATAA
 
Protein sequence
MNKTYLLLLS ALLCFSLQDT KGQAGKKKTD TAGFTKAPAD AIKSFQAFFK DGVASDTGLF 
ISHRAQNTYF FEIPDSLLKR DMLMVATRIS MSSSDFENMV AGERAQPGMM LQWDKSPDGR
FIFLRKVTSR LAIRFSGADS AFRNAVNLQT LDPIIMSFPV KARGKQGKNA IIDIQQLFLA
DVKEISPFAQ NPIQKAMGVP DKKYKVETDR SYIASVQSFE KNIEVRSMIT FTNAEDVYTL
LINRSMVLLP KKPMMGRYAD DRVGYFTKSF SDFNESEPVK DKAFINRWRL EPKEEDKAKM
AQGLLVEPQN PIVFYLDAAT PKKWKEYIRK GVEDWKTAFE SAGFKNAIIA RDLPVNDPLF
NAEDIRYSVI RYTASAIPNA KGPSVIDPRS GEILESDVII YHNILQLLTQ WRFAQTAAND
PSVRSGKLTD DAMGEAIRYV AAHEVGHALG LRHNMGASYA FPVDSLRSAS FTQKYGTTPS
IMDYARNNYV AQPEDKGVKL TPPLLGIYDQ YAINWGYRPI AEAQSPGEEL KTLNSWIARH
QGDPRYRFAE GDLNGSDPSS QRESLGDDVV KASRYGVKNI RYILLNMKKW MTVPGAKYDE
LDDAYLAVLR QYERYLGHVG TAIAGVYQNY PVQGQQQLAY QYSSKKENKA AVAFMLEQYH
NFPLLLESLP KDMIIYDKAG GAKREVPVST YIERLFKKQF QAEVLNFGKL AFLTDNGLQD
GDAAYQATDL LNDIRNDLFS AERAVPKYYD QLLQALYLDR VIGLSSLNKT NVGTKAFAEA
AIARVPESAC FDLDDLVLPS SKELYFQFMS MAVNDKQFKI ESLALGEIKR IKAIVEQRIP
GAKAEVLDHY QYLLKRIQLF LK