Gene Phep_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0725 
Symbol 
ID8251813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp839166 
End bp842555 
Gene Length3390 bp 
Protein Length1129 aa 
Translation table11 
GC content44% 
IMG OID644934374 
ProductTonB-dependent receptor plug 
Protein accessionYP_003091009 
Protein GI255530637 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAC TTTTAAGGGT TATGAGATTA GCGATCCTAC TGCTTATTGC TGCTGTTTTC 
CAGGTCCAGG CAGGTACCTA TGCACAAAGA GTAACCTTAA ATGAAAAAAA CAGCAGTCTT
ACCGAGGTAT TGGAAAAACT GGGTGCACAG AGCGGTTACG ACTTTGTGTA CGGACATGCT
CTGCTAAAAA CTGCAAAACC GATTACCGTT GAACTTAAAA ATGCGCAGTT TGGCGAAGCC
CTGAAAAAAG TATTTGAAGG GCAGGATTTT ACCTATACCG TCCGGAACAG GACCGTAGTG
GTGTACCAAA AGGAAAATTC TCTTTTTAAC CGTATCAGCG ATTATTTTAA GGCCATTAGC
ATCAACGGCA AGGTAACCGA CGAAAAAGGC GGTGCCCTGC CCGGCGTAAC TGTACAGTTA
AAGGGTACAT CTACGATTGC CTATACCAAT GCTGCTGGTA ACTACGCCAT TACTGTGCCC
GATGAAAATG CCGAACTGGT ATTTACCTCT ATTGGTTTTA CTACACAGGA AATTAAGGTG
GGCAATAAAA CTACTATTAA CCTAACACTT AAAGAAAGCA CCAGCCAGCT GGAAGAGACC
GTGATTGTTG CCTATGGCAG CCAAAAGAAA AAAGATCTTA CAGGATCTGT TTCTACCATT
TCCGGCGAAT CCCTGCATGA TCTTCCCTCT ACCATTAATC TCGAACAGGC TTTACAGGGC
CGGGCTGCAG GGGTGCAGGT GATCCAGGAA ACGGGTCAGC CAGGTGCAGC TACAAAAGTA
AGGATCAGGG GTTCTTCTTC GTTACTGGGC TCTAATCAAC CCCTCTATAT CGTTGACGGT
GTTCCTGTAG TAGCTGAAGG AAACATTCCC GCTAATGGAA ATGTGATCAA TAATGACCTG
ATCACGCAGG GATTAAGCAG TCCGCTTAAT AACCTCAGTC CGAATGATAT TGAAACCATA
AGTATTCTTA AGGATGCTTC TGCTACAGCT ATTTATGGTT CGAGGGCAGC AAACGGAGTG
GTCATCATTA CTACCAAAAA AGGTAGTGAA ACAAAAGGCC CGGTATATTC TTTTAATACC
TCTATAAGCT ATCAGAAAGC ACAAACGCTG GATGTACTGA ATGCCGACCA GTTCAGGGAA
CTATGGACAG AGGCTGCCAA CAATTCTACT TCTACTGCAT TGGTAGTACA GCAAATGCGA
AACGGTACTT ACTTTAAAGA TGCAAATACC GACTGGGAAA AGGAACTGAG TCCCATTAAC
CCGCTCTCCA GAATTATAAA CTTTTCCGCT TCCGGGGGAA ATGAAAAAAT GCGGTATTAT
GCCAGTATTG GTACAACCGC ACAGGATGGA ACCTTTAGAA ATTCAAACTT CGACAGAAAA
AACCTATTGG TCAACCTTGA TTTTCAGGCA AGCTCTTCAC TCAAATTTGG CACATCTATC
AATCTCTCCA ACTCTGGTCA AACTTCGCCA GATGCTAGTT TATTTGCCAG AATGTATACC
TACAGACCAG ATATGCCGGT TTATAATCCT GATGGGACGT TTACATTTTC TGATGGTGGC
GTTTCTGAAA ACCCGGTTGC ACTGTCAAAA TCGAGTAACA TCAATAAGAC CAATCTGTTG
ATCGGATCGG CTTTTGGAGA ACTGAACTTT GCCAGACATT TTGTACTGAA GTCTACGCTT
TCTATCAATT ACAATACGGG AAATTTAAAA AGCTTCTACC CAAGTCAGAC TGTTAAGGGA
GGCTGGGCAA AGGCCACAGG CGATGGCACA GGTTTTGGAC AGCAAAACAG TAGCCAGGCT
CTTTCACACC TGTGGGAAAA TATATTAACC TATAACCAGA GCTTTGGTAA ACATGTGCTG
GAAGGTATTG CCGGTGCTTC ATGGCAAGGA AATGAAAACG AATATATGTC GGCTTCGGGT
ATGGGTTTTC CACAGGACGA TATCCTGAAC AACCTGTCTA GTGCCACCAG CAACTTCCTT
ATTTACTCCG GAAAAACACA AAGTGGCCTT GTATCCTTTT TTGGCCGTGT AAACTACAGC
TATGCCGATA AATACCTTTT GTCCGTTTCG GCACGAACCG ATGGTTCTTC CAAATTCGCA
GTTGAAAACA AATGGGCATT TTTCCCTACA GTATCGGCAG CATGGCGACT TTCAGAAGAG
AATTTCCTTA AAGATGTTAG TTTTTTGGAT GAGCTGAAGA TCAGAGGAAG TATAGGGCTT
ACCGGGCAGC AAAACTTTGG TGTATACCAA TGGAGGGCTT TATTTGCTGC CGATCAGTAT
GGTGATAATC CGGCAGTAAT ACAAACCCAG CTGGGCAACA ACCGCCTTAA ATGGGAATTG
ACTACGCAAA CTGATATTGG CCTGGATTTT TCTTTGTTTA AGGGACGTTT AAACGGTGCA
TTGGATTATT ATGTAAAAAA TACCAAAGAT TTGCTATTTA CCGCTTTGTT GCCGGGTAAT
GCAGGTTTTG CCAACGCTAT CAGCAACCTG GGCAGGTCAC AGAATAAAGG CTTTGAACTT
GCCCTGGATG GTGACATCAT CCGAAGTAAA GATTTTACCT GGAACCTGGC TATTAATGTG
GCAACAAATA AAAACAAACT GGTTTCCTTA AACAGCGATT TCCTGAACCC AGCCAATGGC
AACATCACCC CCCCCTCAGG TGGTGGAGTA TTAAGGGTTG GAGAATCTTT AGGTCTGATG
TACGGACGCG TGGCAGAAGG GATCATTCAG AACAAAGCGC AACTGGATGC ATTAAATGCA
CTGGCGCCTG ATGGTATTTA CCAGGTGGCT GGGACAGCAC CCGGTGATCT ATGGTACAGG
GACCTGAATG GAGATGGAAA AGCAACTACA TTGGACCAGA CGGTTATAGG TAACGCTTTG
CCGGACTTTT CAGGTGGTTT TACCAATAGT TTCAAATATA AAAATTTCAG GGTAAATGCC
TTATTTACCT ATTCTGTGGG GAATGACCTG AACTGGACGG CCCAGGCTGC AGCCATTACT
TTTCAATCCC AGGCTTCCAG TGAAAACAAA CTGGCCATTG CCATGAACAG GTGGACGCCG
GAGAAACCCA CCAGTCAGCC ACGTGCAGTA TATGGCGATC CCAATTCCAA TTATTTTGGT
TCAAGTTACT TTGTATATGA TGCCTCCTTC CTCAGATTAA AAAACCTTAC AATCGCCTAT
GCTTTGCCCG CCAGACTGTT ACAAAAAACC AGGTTTATTA AAAACATAGA AATTAATGCT
TCAGGTACCA ACCTGCTTAC GTTTACCAGT TATCCGGGTG CCGATCCCGA AACAAGCAAC
GCTTCCGGAA ACGACATCAA TGTTGGTTTG GATGTTAGCA GGTATCCAAT AGCAAAAGTT
TATACACTTG GTATAAGAGC TGGTTTCTAA
 
Protein sequence
MPKLLRVMRL AILLLIAAVF QVQAGTYAQR VTLNEKNSSL TEVLEKLGAQ SGYDFVYGHA 
LLKTAKPITV ELKNAQFGEA LKKVFEGQDF TYTVRNRTVV VYQKENSLFN RISDYFKAIS
INGKVTDEKG GALPGVTVQL KGTSTIAYTN AAGNYAITVP DENAELVFTS IGFTTQEIKV
GNKTTINLTL KESTSQLEET VIVAYGSQKK KDLTGSVSTI SGESLHDLPS TINLEQALQG
RAAGVQVIQE TGQPGAATKV RIRGSSSLLG SNQPLYIVDG VPVVAEGNIP ANGNVINNDL
ITQGLSSPLN NLSPNDIETI SILKDASATA IYGSRAANGV VIITTKKGSE TKGPVYSFNT
SISYQKAQTL DVLNADQFRE LWTEAANNST STALVVQQMR NGTYFKDANT DWEKELSPIN
PLSRIINFSA SGGNEKMRYY ASIGTTAQDG TFRNSNFDRK NLLVNLDFQA SSSLKFGTSI
NLSNSGQTSP DASLFARMYT YRPDMPVYNP DGTFTFSDGG VSENPVALSK SSNINKTNLL
IGSAFGELNF ARHFVLKSTL SINYNTGNLK SFYPSQTVKG GWAKATGDGT GFGQQNSSQA
LSHLWENILT YNQSFGKHVL EGIAGASWQG NENEYMSASG MGFPQDDILN NLSSATSNFL
IYSGKTQSGL VSFFGRVNYS YADKYLLSVS ARTDGSSKFA VENKWAFFPT VSAAWRLSEE
NFLKDVSFLD ELKIRGSIGL TGQQNFGVYQ WRALFAADQY GDNPAVIQTQ LGNNRLKWEL
TTQTDIGLDF SLFKGRLNGA LDYYVKNTKD LLFTALLPGN AGFANAISNL GRSQNKGFEL
ALDGDIIRSK DFTWNLAINV ATNKNKLVSL NSDFLNPANG NITPPSGGGV LRVGESLGLM
YGRVAEGIIQ NKAQLDALNA LAPDGIYQVA GTAPGDLWYR DLNGDGKATT LDQTVIGNAL
PDFSGGFTNS FKYKNFRVNA LFTYSVGNDL NWTAQAAAIT FQSQASSENK LAIAMNRWTP
EKPTSQPRAV YGDPNSNYFG SSYFVYDASF LRLKNLTIAY ALPARLLQKT RFIKNIEINA
SGTNLLTFTS YPGADPETSN ASGNDINVGL DVSRYPIAKV YTLGIRAGF