Gene Phep_0722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0722 
Symbol 
ID8251810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp836061 
End bp836903 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content41% 
IMG OID644934371 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003091006 
Protein GI255530634 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCT TTTACGCTTT CCTGCTCTTA CTTACAGTTT CAACTTTATC CTGTAACCAG 
GATGCTAAAA AATCGCCTCC AATACCCGGG GAAAGTAAAA CCAGCACAAG CCCCTCTGTT
ACCGACCCTT CAAAAGCAGG TAAGCCTGTT GCCCCAGCCC GCGAGCTGCT GACTGATTTT
ATGACTTTTT GGAACTATTA TTCCGGTAAT GTAAAGCTCA ATCAGGATTT TGAAGCGTAC
GACGTCAAGG GCACATTAAT TACTAAAGAA ATTTTCTTAA AAAACTTAAA CAGCGGCCTG
TACTTTCCTT TAAGAGTTTA CACCAAATCT GCAGAACTGG GTTATAAGCT CCAGGAAATT
CCGGCCACAG CAGACACCAT GATCCCGGCT TATATGAAGC AGTTTTCAAA GCAGGAACTG
ACCTATTACA AAATGCAGGG CAAAAACATT CCTTCCTTTA ATTTTACCGC TATAGATGGG
AATACTTATA CATCGGAAAA TACCAAGGGA AAAATCGTTT TGTTTAAATG CTGGTTTATC
AGCTGCCTGC CCTGTGTACA GGAAATGCCC GCATTAAATG ATCTGGTAAA AAAATACAAG
GACAGGAAAG ACATCTTGTT TATCAGCCTG GCAATAGATG GTAAAAAAGA GTTACAGCAG
TTTTTAGCCA AGACGCGGTT TGATTATGCC ACCATTCCTG ACCAGGAAAA CTATATGAGC
AAAAAATTAA ACGTTACAGG CTACCCTACT CATTTTTTAA TTGATAAAGC CGGTAAACTG
GTAAGGGCAC TACACAATGA AACTGAGCTT GCCGAGGCTT TGGAAAAGGA AATAGCCTTA
TAA
 
Protein sequence
MKPFYAFLLL LTVSTLSCNQ DAKKSPPIPG ESKTSTSPSV TDPSKAGKPV APARELLTDF 
MTFWNYYSGN VKLNQDFEAY DVKGTLITKE IFLKNLNSGL YFPLRVYTKS AELGYKLQEI
PATADTMIPA YMKQFSKQEL TYYKMQGKNI PSFNFTAIDG NTYTSENTKG KIVLFKCWFI
SCLPCVQEMP ALNDLVKKYK DRKDILFISL AIDGKKELQQ FLAKTRFDYA TIPDQENYMS
KKLNVTGYPT HFLIDKAGKL VRALHNETEL AEALEKEIAL