Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0715 |
Symbol | |
ID | 8251803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 827974 |
End bp | 829572 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644934364 |
Product | Alpha-galactosidase |
Protein accession | YP_003090999 |
Protein GI | 255530627 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTGTG TTAAATCAGG TATGAAAAAA TTAATCGGGT TGTTATGGGT ATCCCCCTGG TATAAATGTT TTGCAGGTAT ACCCATATTT TTACTTTGTG CATTAAGTGC AACAAATTTA TGGGCGCAAA CAAATTCAAC ATTTATTTTA ACACCGGCAG CCAAACCGGA ACCCCGTATC AACGGCCCCA GAGTATTTGG TGTCCGGCCC AATCATCCCA TCTTGTTTAC CATTCCGGCA TCAGGCAACA GGCCCATGCA GTTCTCTGCT AAACCCCTGC CCAAAGGTGT AAAGGTAGAT GCTAAAACCG GGCGCATTTC AGGATCAGTT GCCAAACCGG GTACTTATAC CCTCAACATC GAAGCTTCCA ATTCTCTGGG TAAAGCCAGC CGGGAATTCA AAATAATAGT AGGAGAAGAA GTGGCGCTTA CGCCGCCAAT GGGCTGGAAC CATTACAACA TCTATGGCAC CAGGATTACC CAGGAACAAG TATTGACGCA GGCAAAAGCC ATGGCCAGTA CCGGTCTGAT CAATTATGGA TGGTCGTATA TGAACATTGA TGATGGCTGG CAGGGCAAAC GTGGTGGTAA ACATCATGCC ATTCTTCCGG ATAGCAGCCG GTTTCCGGAT ATGCAGCAAC TGGTGGATGA GGTTCATGGT CTTGGCCTTA AAATTGGCAC CTATTCTACC CCCTGGGTAG AGTCTTACGG TCACCGTACA GGTGGTTCGG CCATGAATGC CGAAGGAACA TTTGAACGCA CTAAAGAGAA CATCCCCAGA AATAAAAAGC AGCTGCCTTA TGCAATCGGG ACCTATCATT TCTGGGATAA TGATGCCAGA CAATTTGCAG AATGGGGCTT TGATTACCTG AAGTACGACT GGAACCCTAT AGAGTTAAAC GAAACAAAGG CCATGTATGA TGCACTCAGG AACAGTGGCC GCGACCTGGT TTACAGTTTA TCCAACAGTA CCCCCTTTGA AACCATTGCT GATCTGTCAC AGGTATCAAA TGCATGGCGT ACGGGTGGCG ACATTAAAGA CAACTGGAAA AGTTTAAAAA GCAGGATTTT TACACAGGAC AAATGGGCAA AGTTTGCCCG GCCGGGTCAC TGGAACGATC CGGATATGAT GATATTGGGG GTGGTAGGCT GGAACTCGGC AGAAAAATGG CCCTCCAAAC TAAGTTCCGA TGAGCAATAT ACTCACATGA CGGCCTGGTG CCTGATGTCG GTACCCCTGT TGCTGGGGAA CGACATTTCA AAACTGGACA ACTTTACCTT AAGCCTGCTC ACAAACGATG AAGTGAATGC TGTAAACCAG GATCCATTGG GTAAACAGGC CATTGTAATT GCCAAAGAAG GGGATATTGG CGTAATGGCA AAAGATATGG AAGACGGGAG CAAGGCTGCA GGTCTGTTTA ACCTGGCTGA CGATGGAAGT CAGCAGCTAA CCCTAAAATG GTCTGATCTG GGTATCAAAG GTAAATATAA GCTGCGCGAC CTGTGGCGCC AACAAGATCT TGGAATTTTT GAAAATGAAT TTAAAACTGA AGTAGCACAA CATGGAGTGG TTATGCTACG CTTGTTTCCT GTTAAATAA
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Protein sequence | MNCVKSGMKK LIGLLWVSPW YKCFAGIPIF LLCALSATNL WAQTNSTFIL TPAAKPEPRI NGPRVFGVRP NHPILFTIPA SGNRPMQFSA KPLPKGVKVD AKTGRISGSV AKPGTYTLNI EASNSLGKAS REFKIIVGEE VALTPPMGWN HYNIYGTRIT QEQVLTQAKA MASTGLINYG WSYMNIDDGW QGKRGGKHHA ILPDSSRFPD MQQLVDEVHG LGLKIGTYST PWVESYGHRT GGSAMNAEGT FERTKENIPR NKKQLPYAIG TYHFWDNDAR QFAEWGFDYL KYDWNPIELN ETKAMYDALR NSGRDLVYSL SNSTPFETIA DLSQVSNAWR TGGDIKDNWK SLKSRIFTQD KWAKFARPGH WNDPDMMILG VVGWNSAEKW PSKLSSDEQY THMTAWCLMS VPLLLGNDIS KLDNFTLSLL TNDEVNAVNQ DPLGKQAIVI AKEGDIGVMA KDMEDGSKAA GLFNLADDGS QQLTLKWSDL GIKGKYKLRD LWRQQDLGIF ENEFKTEVAQ HGVVMLRLFP VK
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