Gene Phep_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0713 
Symbol 
ID8251801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp825049 
End bp826314 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content41% 
IMG OID644934362 
Productcoagulation factor 5/8 type domain protein 
Protein accessionYP_003090997 
Protein GI255530625 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0683119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATAA AATCAATTAT CCGAAATTTC CTTTTTCTCC TGCTAGCGGG TGTGTGCTTT 
ACCTCTTGTG AGAAAATGGA CGCCACCTAC AAGGATTTCC TGAATGGCGG CGAAATCGTT
TACAATGGTA AGCCCGAGCT TTTACAGGTT TTTTCAGGTA ACAAAAGGGT TAAATTAAAA
TGGTATATCG TATCAGACCC AAAAATAACC TCTGCAAAAA TATACTGGAA CAATCCGGCG
CATATAGAAG GAGAACCTGT TATTCCGGGT CAAAGACCTG CAGGCCGCGA CTCTGTTGTT
CTGGCTATAC AGCGGGGCAG TGGTACCGAT TCAGTGCAAA CATTTATTGA CAGGCTGAAA
GAAGGAATCT ATACCTTTAG TGTTTTCATG TACGACGATA AAGGACATTC TTCAGTTAAA
TCTGAAGTTA TTGGCGATGT ATATGGCGAT AATTATCAGG CATCCATTAC CAACAGACCC
CTTGATATGC CCCAGCTCAA TATTTTAAAT GGTAAGAGCG ACTTATACAT TCCATGGTAC
GGAGTAGCCC AGCAGGCAGT AAGGATAGAC CTTATTTATA CCAATACTGC AGGCCAGGTT
AAAACTGTTC AGAAGAAAAA GATTCCCAAT CCTGCCGATG CCCGCAGGGG GATGATCTGG
CTGGACAGGG ATACCCTTTT CAACTTTAAG GATGCGCCAG GCGCAAAAGT AAGATACAGA
ACTGCTTATT TGCCGGAAGA AACGGCTATC GATACTTTTT TTACAGCATA TACAGATATA
GGTTACAAGT ATTATGTACC GCCAACCCCT CCGTCAAAAG ATGAAAACCT TGCGTTAAAG
AAAAAGGTAA CCACCAGCAG TGGAACAGGG ACTACGCTTA CCGATGGAGA TCGTACAAAT
GCAACTGTTT GGCAGCCAAG TAGTTCTGAG CGTGCTGATC TGAACGTCTG GTTCTATGTC
GACCTGGGCT CTGCTGTTGA TTTTAATACG GTACAGACTT ATTTTATTAA AGATCCGGGT
AAGATTACCT ATTATGAGGT ATTGTATACT GAAGCCGCAA CTATAGCAAC GGATACGAAA
TGGAAAAGAG CTTACATCAA GTTCGGTGCA CCTGAAACAG AAGATATATT TGTTTCCACA
AATGCAGATA ATACAGCGCT TGTTAACCTG AAAGGCCGGT TTATAAAAAT CAATATTGGT
TTAAGAGATG AGGCCACAAA TATTAACGTC TCTGAAATTG AAGTTTATAA GAAAGATAAA
CTATAA
 
Protein sequence
MYIKSIIRNF LFLLLAGVCF TSCEKMDATY KDFLNGGEIV YNGKPELLQV FSGNKRVKLK 
WYIVSDPKIT SAKIYWNNPA HIEGEPVIPG QRPAGRDSVV LAIQRGSGTD SVQTFIDRLK
EGIYTFSVFM YDDKGHSSVK SEVIGDVYGD NYQASITNRP LDMPQLNILN GKSDLYIPWY
GVAQQAVRID LIYTNTAGQV KTVQKKKIPN PADARRGMIW LDRDTLFNFK DAPGAKVRYR
TAYLPEETAI DTFFTAYTDI GYKYYVPPTP PSKDENLALK KKVTTSSGTG TTLTDGDRTN
ATVWQPSSSE RADLNVWFYV DLGSAVDFNT VQTYFIKDPG KITYYEVLYT EAATIATDTK
WKRAYIKFGA PETEDIFVST NADNTALVNL KGRFIKINIG LRDEATNINV SEIEVYKKDK
L