| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0708 |
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| Symbol | |
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| ID | 8251796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 816223 |
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| End bp | 816849 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644934357 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003090992 |
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| Protein GI | 255530620 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.236556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGTTGT GCTTTGAAAG CCTTAATGTA ATTAAAAAAG GCAATGACGC TTTATCGATC
AAAGCGTTGT TGATTAAATT GACCAACCAT GATCATCATT CTTTTCATGA ACTTTACAAC
AGGTTTAGTG TGCAGCTCTA TGCAAATATC TTAAGAATGG TAAGGGATCA GGATCTGGCA
CAGGAGATTT TGCAGGATGT GTTTGTAAAA GTATGGGAAA AACGCGAACT TATTGACCCA
GAAAAGCCTT TTAATGCTTA TTTGTTCCGG ATTGCCAAAA ATACGGTTTA CGATCATTTC
CGAAAAATAG CGATGGAAAA GAAGCTGGAA ACACATATGC TTAGCAATGG CACCGAAACC
TACAGCCATA TCGAAGAAGA ACTTATTTAT AAAGAAAGCA GTCAGCTATT TTTAAATGCT
ATTGATAAGC TTTCACCACA GCGAAAACAG GTATTTACTT TATGTAAACT GGAGGGTAAG
AGCTATCATG AGGTGAGTAA CCTGCTGAGC ATCTCTACTT CAACAGTGAG CGACCATCTG
TTGAAGTCAA ACAAATTTAT CCGGGCCCAG TTGCTGATCT CAGATCCGGT AGTTTTTGTG
CTGATAGGGT ATGTGTTAAT ATCATGA
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| Protein sequence | MTLCFESLNV IKKGNDALSI KALLIKLTNH DHHSFHELYN RFSVQLYANI LRMVRDQDLA
QEILQDVFVK VWEKRELIDP EKPFNAYLFR IAKNTVYDHF RKIAMEKKLE THMLSNGTET
YSHIEEELIY KESSQLFLNA IDKLSPQRKQ VFTLCKLEGK SYHEVSNLLS ISTSTVSDHL
LKSNKFIRAQ LLISDPVVFV LIGYVLIS
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