Gene Phep_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0703 
Symbol 
ID8251791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp811046 
End bp812137 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content42% 
IMG OID644934352 
ProductABC-2 type transporter 
Protein accessionYP_003090987 
Protein GI255530615 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.422501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC CTTACAACAA CACTAAAGCT ACACTGGCCC TTGCCAAAGC AAGCTTCCGT 
TCCATTATGC GGAGCCCCTC TGCAGTTGTG TTTACATTGG CCTTCCCTTT AATATTTATT
CTTGTCTTTG GCTTTCTGGG CAATGGTGGT GTAAAAGTTA AACTGGCTGT AGCCCCAGGG
TCTGACCTGC AAAACCCCAT TATACTGGCA CTGGAACAGA TACCCGTTAT AAAACTGGTT
AAAGATGAAT CCCGGGAAGA AATAAAGACC GGATTGGAAA AAGGCAATAT TGATGCTTTG
ATCGATGTAA AAAAGAATGA AGCCGGTACC CCTGCTTATC TCGCAAATGT GCAATACACT
TCTGCTTCCC TGGATAAAGG CAGCATTCTG AAATCCATAT TGAACAATTT ACTATATAAC
CTGAATGCCA GGGATGTAAA ACCTACTGTT GCACAGCTGA ATGAAAGTAC AGTACAGGGG
CGGATTTACC GTACCATAGA CTTTATTTTA CCCGGACAGC TTGGTTTTTC CTTATTGAGT
ACAGGTGTTT TTGGAACCGC CTTTGTATTT TTCAGTTTAA GGCAAAACCT GGTGATCAAG
CGTTTTTTTG CAACACCTGT TAAACGCTCC AGCATTGTTT TTGGAGAAGG CCTGGCCAGG
ATAGGTTTTG CTTTACTGGG TGCTGTTTTT ATCATCCTTA TCGGTCATTT CTTTTTCCAT
TTTACCTTGA TACATGGAGT GGTTACGGTG CTAAACATGC TGCTGCTTTC GGTGATCGGA
CTTATCGTAT TTATGGGCTT CGGCTTTGTC GTTTCAGGCA TAGCGAAAAG TGAAAGTACC
ATTCCACCCA TTTCAAACAT CATTACCCTG CCCCAGTTTT TACTTTCGGG CACCTTTTTT
TCCATTGATG CTTTTCCGTC GTGGTTACAA CCAATCAGCC ATGCCTTACC ACTTACCTAT
TTAAACGATG CCATGAGAAA AGTAGCCTTT GAAGGTGCTG GACTATGGGA TGTAAAACAC
CAGATCCTGA TCATGCTGAT CTGGGGTATT GGCATTTATA CGGTTGCAGT TAAAGTATTT
AAGTGGGAAT AA
 
Protein sequence
MSKPYNNTKA TLALAKASFR SIMRSPSAVV FTLAFPLIFI LVFGFLGNGG VKVKLAVAPG 
SDLQNPIILA LEQIPVIKLV KDESREEIKT GLEKGNIDAL IDVKKNEAGT PAYLANVQYT
SASLDKGSIL KSILNNLLYN LNARDVKPTV AQLNESTVQG RIYRTIDFIL PGQLGFSLLS
TGVFGTAFVF FSLRQNLVIK RFFATPVKRS SIVFGEGLAR IGFALLGAVF IILIGHFFFH
FTLIHGVVTV LNMLLLSVIG LIVFMGFGFV VSGIAKSEST IPPISNIITL PQFLLSGTFF
SIDAFPSWLQ PISHALPLTY LNDAMRKVAF EGAGLWDVKH QILIMLIWGI GIYTVAVKVF
KWE