Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0703 |
Symbol | |
ID | 8251791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 811046 |
End bp | 812137 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934352 |
Product | ABC-2 type transporter |
Protein accession | YP_003090987 |
Protein GI | 255530615 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.422501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC CTTACAACAA CACTAAAGCT ACACTGGCCC TTGCCAAAGC AAGCTTCCGT TCCATTATGC GGAGCCCCTC TGCAGTTGTG TTTACATTGG CCTTCCCTTT AATATTTATT CTTGTCTTTG GCTTTCTGGG CAATGGTGGT GTAAAAGTTA AACTGGCTGT AGCCCCAGGG TCTGACCTGC AAAACCCCAT TATACTGGCA CTGGAACAGA TACCCGTTAT AAAACTGGTT AAAGATGAAT CCCGGGAAGA AATAAAGACC GGATTGGAAA AAGGCAATAT TGATGCTTTG ATCGATGTAA AAAAGAATGA AGCCGGTACC CCTGCTTATC TCGCAAATGT GCAATACACT TCTGCTTCCC TGGATAAAGG CAGCATTCTG AAATCCATAT TGAACAATTT ACTATATAAC CTGAATGCCA GGGATGTAAA ACCTACTGTT GCACAGCTGA ATGAAAGTAC AGTACAGGGG CGGATTTACC GTACCATAGA CTTTATTTTA CCCGGACAGC TTGGTTTTTC CTTATTGAGT ACAGGTGTTT TTGGAACCGC CTTTGTATTT TTCAGTTTAA GGCAAAACCT GGTGATCAAG CGTTTTTTTG CAACACCTGT TAAACGCTCC AGCATTGTTT TTGGAGAAGG CCTGGCCAGG ATAGGTTTTG CTTTACTGGG TGCTGTTTTT ATCATCCTTA TCGGTCATTT CTTTTTCCAT TTTACCTTGA TACATGGAGT GGTTACGGTG CTAAACATGC TGCTGCTTTC GGTGATCGGA CTTATCGTAT TTATGGGCTT CGGCTTTGTC GTTTCAGGCA TAGCGAAAAG TGAAAGTACC ATTCCACCCA TTTCAAACAT CATTACCCTG CCCCAGTTTT TACTTTCGGG CACCTTTTTT TCCATTGATG CTTTTCCGTC GTGGTTACAA CCAATCAGCC ATGCCTTACC ACTTACCTAT TTAAACGATG CCATGAGAAA AGTAGCCTTT GAAGGTGCTG GACTATGGGA TGTAAAACAC CAGATCCTGA TCATGCTGAT CTGGGGTATT GGCATTTATA CGGTTGCAGT TAAAGTATTT AAGTGGGAAT AA
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Protein sequence | MSKPYNNTKA TLALAKASFR SIMRSPSAVV FTLAFPLIFI LVFGFLGNGG VKVKLAVAPG SDLQNPIILA LEQIPVIKLV KDESREEIKT GLEKGNIDAL IDVKKNEAGT PAYLANVQYT SASLDKGSIL KSILNNLLYN LNARDVKPTV AQLNESTVQG RIYRTIDFIL PGQLGFSLLS TGVFGTAFVF FSLRQNLVIK RFFATPVKRS SIVFGEGLAR IGFALLGAVF IILIGHFFFH FTLIHGVVTV LNMLLLSVIG LIVFMGFGFV VSGIAKSEST IPPISNIITL PQFLLSGTFF SIDAFPSWLQ PISHALPLTY LNDAMRKVAF EGAGLWDVKH QILIMLIWGI GIYTVAVKVF KWE
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