Gene Phep_0693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0693 
Symbol 
ID8251781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp801787 
End bp802662 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content44% 
IMG OID644934342 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_003090977 
Protein GI255530605 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID[TIGR03381] N-carbamoylputrescine amidase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.760748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAG TAAAGGTTGG AATGGTACAG ATGAGCTGTA CCGGCAATAA ACAGGAAAAT 
TTAGATAAAG CGATTGTAAA AATCCGGGAA GCTGCAGCAA AAGGCGCACA GATTGTGTGC
TTGCAGGAAC TTTTTACTTC ATTGTACTTT TGTGATGTTG AAGATTATGC AAACTTTGAT
TTAGCAGAAG CAATTCCAGG CCCTTCAACA GATAGCTTAC AGGTTGTAGC AAAGGAATTG
GGGGTAGTGA TCATAGCGTC GTTATTTGAA AAACGTACGG CAGGGTTATA CCACAATACC
ACAGCTGTGC TGGATGCCGA CGGGGCTTAC CTGGGTAAAT ATCGTAAAAT GCACATCCCT
GACGATCCCG CCTTTTATGA GAAATTCTAC TTTACACCCG GAGATCTGGG CTATAAGGTT
TTTCAGACAA AATTTGCTAA AATAGGGATC CTGATCTGCT GGGACCAGTG GTATCCTGAG
GCATCGCGTA TTACTGCGTT GATGGGTGCA GAGATCATGT TTTATCCAAC TGCTATCGGA
TGGGCTACAG ATCAGGATGA GGAAACCAAT AAAGACCAGT ACAATGCCTG GCAAACCATT
CAGCGCTCAC ATGCAGTTGC AAACGGAGTA CCTGTTGTTA GTGTAAACCG GGTGGGTTTT
GAACAAAATG GCGCCATGAA ATTCTGGGGG GGGAGCTTTG CCGCAAATGC CCAGGGCAAA
ATACTTTATT TAGGTTCACA CGACCAGGAA GAAACTGAAG TAGTGGAGCT GGACCTGACG
GAGTCTGATT TTTTCCGTAA GCACTGGCCT TTTTTAAGAG ACAGAAGGAT AGATTCATAT
CAGCCAATTA CCAAGAGGTT CATTGATGAG GACTAG
 
Protein sequence
MAKVKVGMVQ MSCTGNKQEN LDKAIVKIRE AAAKGAQIVC LQELFTSLYF CDVEDYANFD 
LAEAIPGPST DSLQVVAKEL GVVIIASLFE KRTAGLYHNT TAVLDADGAY LGKYRKMHIP
DDPAFYEKFY FTPGDLGYKV FQTKFAKIGI LICWDQWYPE ASRITALMGA EIMFYPTAIG
WATDQDEETN KDQYNAWQTI QRSHAVANGV PVVSVNRVGF EQNGAMKFWG GSFAANAQGK
ILYLGSHDQE ETEVVELDLT ESDFFRKHWP FLRDRRIDSY QPITKRFIDE D