Gene Phep_0690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0690 
Symbol 
ID8251778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp797929 
End bp798903 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content40% 
IMG OID644934339 
ProductRibonucleoside-diphosphate reductase 
Protein accessionYP_003090974 
Protein GI255530602 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.575162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAG AAGAAGTATT ATTAAAAGAA AACAAAGACA GGTTTGTTCT TTTGCCGATT 
AAATATCCTG AAATCTGGGA AATGTATAAG AAGAGTGAGG CCAGTTTCTG GACTGCCGAA
GAAATTGATC TTTCAGATGA TCAGAAACAC TGGGATAACC TGAATGATGG GGAAAGACAT
TTTATTTCTC ATATTCTGGC ATTCTTTTCG GCCAGTGACG GTATCGTAAA TGAGAACCTT
GCCGTAAACT TTATGAGTGA GGTGCAATTG CCGGAAGCAC GTTGCTTTTA TGGCTTCCAG
ATCATGATGG AAAATATCCA TTCTGAAACT TATGCCTTGC TTATTGACAC ATATATTAAA
GATCCTGATG AAAAGGACAG GCTGTTCCAT GCCATTGAAA CCGTTCCATG TGTAAAGAAA
AAAGCAGAGT GGGCCCTGCG CTGGATTGAT AATGGCTCTT TTGCAGAACG TTTGGTAGCT
TTTGCTGCGG TAGAAGGAAT TTTCTTTAGC GGTAGTTTTT GTTCTATCTT CTGGTTAAAG
AAACGTGGTT TAATGCCGGG ATTAACTTTC AGTAATGAAC TGATCTCGAG AGACGAAGGT
TCGCACTGCG AATTTGCCTG TTTATTGTAT GGCATGCTGA AAAATAAATT AAGCCAGGAG
CAGGTACATG GTATTATCCG TGATGCGGTT GAGATAGAAA AAGAATTTGT TACCGATGCA
TTGCCGGTTG CACTGATTGG TATGAATGCA AAGTTAATGT CGCAGTACAT TGAGTTTGTG
GCCGATAGAT GGTTGCAGGA ATTGGGCTAT AGCAAAATAT ATAATGCCAC CAACCCGTTT
GATTTTATGG AAATGATCTC TTTACAGGGC AAAACTAACT TCTTTGAAAA AAGGGTTGGT
GATTACCAGA AAAGCGGAGT GTTGACTTCA ACAGAAGATA AAGCAGCAGC TTTCTCTTTA
GATGATGACT TTTAG
 
Protein sequence
MQEEEVLLKE NKDRFVLLPI KYPEIWEMYK KSEASFWTAE EIDLSDDQKH WDNLNDGERH 
FISHILAFFS ASDGIVNENL AVNFMSEVQL PEARCFYGFQ IMMENIHSET YALLIDTYIK
DPDEKDRLFH AIETVPCVKK KAEWALRWID NGSFAERLVA FAAVEGIFFS GSFCSIFWLK
KRGLMPGLTF SNELISRDEG SHCEFACLLY GMLKNKLSQE QVHGIIRDAV EIEKEFVTDA
LPVALIGMNA KLMSQYIEFV ADRWLQELGY SKIYNATNPF DFMEMISLQG KTNFFEKRVG
DYQKSGVLTS TEDKAAAFSL DDDF