Gene Phep_0681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0681 
Symbol 
ID8251769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp791187 
End bp791948 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content45% 
IMG OID644934330 
Producthypothetical protein 
Protein accessionYP_003090965 
Protein GI255530593 
COG category[R] General function prediction only 
COG ID[COG4821] Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGCAA AAGAATGGCT CAATAATGCA CGTGCAATTA TGACCCAAAT TGAAGAAACA 
CAAATGGACA ATATCCGCAA AGCAGCAGAG ATCATGGCCG ATTCCATTGA AGCCGGCCGT
TGGGTTCATA CTTTTGGATG TGGGCATGCG ACCATACCCA TAGAAGAGAT GTATCCCAGG
ATAGGAGGTT TCGTAGGCTT TCACCCCATG ATCGAATTGC CGCTTACCTT TTTTACCAGG
ATTACCGGAG AGATGGGGGT GCACCAGTTT GTTTTTTTAG AAAGGGTAGA AGGTTATGGC
ATTGAGATCA TGAAGGGCTA TAACTTTGAT ACCCGTGATA CGATGTGGTT GTTTTCGCAT
TCGGGGATAA ATAATGTGAA CATAGATGTG GCCCTGGAAG CGAAGAAAAA GGGGATGAAG
GTAATCGTTT TTGGTTCTGC TGCAGAAGCT AAGGGGAAAC AGACCCGCCA TTCAAGCGGA
AAAAACATAT TTGATATAGC CGATCTGGTA GTCGATTCCT GTGCACCCAT CGGCGATGCT
TCTGTATCGC TTAAAAACCA CCAGGATAAA GTAGGGCCTG TTTCTACAAT GGCCTTTATT
ACCTGTGTAT GGATGACGGT GACCACTGTT GCCGAGATAC TGGCAGAAAG AGGAGTAAAG
CTATATATCC ATCCTTCGCA CAATGTTCCG GGCGATGAAA CTGCAAAGGA CCGTCTGGAA
GAGGCTTTAA GGGTATACAA AGAAAGAATT ACAGGGGTAT AG
 
Protein sequence
MLAKEWLNNA RAIMTQIEET QMDNIRKAAE IMADSIEAGR WVHTFGCGHA TIPIEEMYPR 
IGGFVGFHPM IELPLTFFTR ITGEMGVHQF VFLERVEGYG IEIMKGYNFD TRDTMWLFSH
SGINNVNIDV ALEAKKKGMK VIVFGSAAEA KGKQTRHSSG KNIFDIADLV VDSCAPIGDA
SVSLKNHQDK VGPVSTMAFI TCVWMTVTTV AEILAERGVK LYIHPSHNVP GDETAKDRLE
EALRVYKERI TGV