| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0680 |
|---|
| Symbol | |
|---|
| ID | 8251768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 790014 |
|---|
| End bp | 791168 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644934329 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003090964 |
|---|
| Protein GI | 255530592 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.668541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAATA AAAAGACCGT CTTTCTCTCC GCCTGTTTTG GTATGCTGTT GTTTGGCATT
ACACTTATCA CGCTCGGTTC GGTTGCCCCC ATGCTGACCA GCAGGTTTAA CCTCGACCAG
ATTGCTTCAG GCACCCTGTT TTCTATACTT CCTTTTGGTG TGCTCACCGG TTCCCTGTTG
TTTGGCCCTT TTTGTGATAA GTACGGCTAT AAGTATTTAC TGGCTTTTTC GGCTTTGCTG
ATCGGCATAG GTTTTGAGGG GATTGCATTT TCCGCTTCCT TTTTATTGCT CAAGGTCTGT
ATTTTCCTGT TTGGTTTAGG TGGTGGAGCA ATTAATGGGG CTACCAATGC AGTAGTCGCA
GATATCAGTA CAAAAGATAA AGGTGCTAAC CTTAGTCTGA TTGGTGTGTT TTTTGGAATT
GGTGCCCTGG GCATGCCTTT TATCCTGGGT TTTCTGGAAA ATACAGTTTC TACCCGGCAC
ATTGTAGCAA GTGTTGGTTT CCTTGCTTTT CTGGCAGCGG CAGTTTTTGC CTTTATTACC
TTTCCGCTGC CTAAACATAT CAATGGTTTC CCCATCAGGC GTAGCCTGTC CTTATTAAAA
GACCGTGTGC TGATCATTGT TGCACTTTTT CTGTTTTGTC AGTGCAGTTT TGAAGCCATT
GTCAACAACT GGACCACTGC TTACCTGATT AAACAAGTTG GGGCTTCCCA AAGCATGGCC
CTGTATGCCC TTTCTTTATT TGTGGTGGGT ATGACGGTTA TGCGCCTGCT CATGGGCAGC
GTACTCAGAA ATCTGAGTGT AAAAGCAATA CTTGCTATTT CCTTTGTGTT GCTGCTGGCC
GGAATTGCCT TATTGAATAC CTCAGTTTAC CTTAGGGCTG TTACAGGTCT CGTGCTTGTT
GGCGGTGGAC TGGCAGCAGG TTTTCCGGTA ATGCTGGGTA TTGTGGCTAC GCGTTATGCC
GACCTTTCGG CAACGGCTTT TAGCCTGGTA CTGGTTATGG CTTTATTTGG AAATATGCTT
GTCAATTACC TTATGGGCAT AGCTGCCAAT GCTTATGGAA TTCATTACCT GATTTATGTA
GCTCTTGCAG AACTGGTGCT GATGACCACA TTGGGAATGC TGGTATTGGG GCGCCACAAA
AGTAAAACAT CTTAA
|
|---|
| Protein sequence | MFNKKTVFLS ACFGMLLFGI TLITLGSVAP MLTSRFNLDQ IASGTLFSIL PFGVLTGSLL
FGPFCDKYGY KYLLAFSALL IGIGFEGIAF SASFLLLKVC IFLFGLGGGA INGATNAVVA
DISTKDKGAN LSLIGVFFGI GALGMPFILG FLENTVSTRH IVASVGFLAF LAAAVFAFIT
FPLPKHINGF PIRRSLSLLK DRVLIIVALF LFCQCSFEAI VNNWTTAYLI KQVGASQSMA
LYALSLFVVG MTVMRLLMGS VLRNLSVKAI LAISFVLLLA GIALLNTSVY LRAVTGLVLV
GGGLAAGFPV MLGIVATRYA DLSATAFSLV LVMALFGNML VNYLMGIAAN AYGIHYLIYV
ALAELVLMTT LGMLVLGRHK SKTS
|
|---|
| |