Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0677 |
Symbol | |
ID | 8251765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 787585 |
End bp | 788121 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644934326 |
Product | bifunctional deaminase-reductase domain protein |
Protein accession | YP_003090961 |
Protein GI | 255530589 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.755409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTAAAA TAATATTAGG ATTAGCTGTA ACATTGGATG GCTATATTGA AGGGCCTAAC GGAGAATTTG ACTGGTGTTT TACAGACCAG GACTATGGTT TGAAAGCGTT TTTTACCCGT ATAGATGCTA TCTTTATTGG CCGTAAAAGC TACGAAATGG CTCAGCAATA TGCGGATAGC AACAATGGGG AGTTGGTGCC GGGTATGCCG GCAATGGTAG AGTATGTATT TTCTAATACG CTGAAATCGG TAAAAGAAGG TGCTGAGCTT ATAGCTGGGG ATAGTATTGC CGAAGCAGGA AGGATTAAGG CGCAACCAGG GAAAGATATA TGGTTATTTG GTGGTGCCTC GCTTACCGAT GCCTTAATGA AAGAAGGATT GGTAGATGAG TTATGGATGT CGGTGCATCC TATACTCCTT GGTAACGGTA AACCCTTATT CCGTACGCAG GATACCCGTA CGCAATTAAC GCTGCTGGAA AGCAAAACTT ATGAAACCGG CCTGGTATCG CTTCGTTACA GCATCAAAAA AGAGTAA
|
Protein sequence | MRKIILGLAV TLDGYIEGPN GEFDWCFTDQ DYGLKAFFTR IDAIFIGRKS YEMAQQYADS NNGELVPGMP AMVEYVFSNT LKSVKEGAEL IAGDSIAEAG RIKAQPGKDI WLFGGASLTD ALMKEGLVDE LWMSVHPILL GNGKPLFRTQ DTRTQLTLLE SKTYETGLVS LRYSIKKE
|
| |