| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0662 |
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| Symbol | |
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| ID | 8251750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 770604 |
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| End bp | 772055 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644934311 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003090946 |
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| Protein GI | 255530574 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAG TCATCTCCTA TAATACATTA CTTAAACTTA GCTTTGCTTT GTCTTTTATT
TTACTGCTGG GCCAGCCACA AAAATCGGTT GCGCAGGAAG TAATTACCAT TCAGCAGGCA
ATTGAAGAAA CATTGCACAA TAACCTTCAG ATCAAACAAG CTAAGCTTAC CGAAAGCCTT
TCCGACGAAA ACCTCAGTCA GGCCAAGAAT GCGCTTTTGC CAACACTAAA TGGTAGCGGG
AGTTTCAATA CCAATTTCGG ACGAAGTCTG GATCCTTCAA CACAATCTTT TAACAGCCAG
AAGTTCTCTT CTTTTAATGG TGGAGTTTCT ACTAGCGTAA CTGTATTTCA GGGCTTTCAG
AAGCTCAACC AGATTAAGCA GAACAAGCTT TTACTGGATG CCGACAAAAC TAATGTAGAA
AAAATTAAAA ATGACCTGGT GCTGCAGGTG GTTACGGCTT ATATGCAGAT CCTGTATAAC
AAAGATTTTT TACAGGCAGC AAAGCAGCAG CTTACTGTAG CCCAGAAACA ATTGAAACAG
CAACAGGAAT TACTCGATGT AGGCAATAAA ACACTGGCCG ACCTGGCTGA ATCTAAGTCG
CAGGTGGCAA CGGCAGAACT GGATGTAACT ACTGCTGAAA ATGCGCTCAC CATTTCTTAT
TTAACCCTGG CCCAGTTAAT GGATATTCCG TCTTCAACTA AATATCAGGT TAAGGCCCCT
GATGTAGCTA ACTTTGAAAA TTCGGCATTC ATTTATGATC CTGAACAGGT ATATACAGAT
GCACTTTCTT TTTTCCCGGA TATTAAACTG GCTGGTTTAA GAAGTGAAGC CGCTAAGAAG
GGGATTACGA TAGCCAAAGG GAATTACTAC CCAAGCCTGT CTTTTGGGGC AGGTCTGAAC
TCCAACTATT CAAGTGGCAG ACAGCGGATA ACTTCTATAC AGGCGAACGG CTTTAAAGAA
ATTGGGAGAA CACAGACAAC AAATGAGGCT GTAGTAACGC CCGATTTTAC AACGTTTGCA
GAAAACTATA AGTTTAAAGA CCAGCTTACA GATAATTTTG GCCAGTATGT TGGTGTAAGG
CTGGAGATTC CGATTTTTAA TGGCTTTACT GCGCGGTCCA GTGTAAGAAA GGCAAAAATC
AATTACCAGC AAAACCAGAC TGATGAGCAA CTGACAAAGA ATAACCTGAA TAAAGTAATA
TATCAGGCTG TTGCAGATTT AAAAGCTGCC CGGAGTACTT TTGAATCTTC AACCAGAACG
TTTAATGCCA GAAAAGAAGC TTTTTCTGTA ATTGAACAAC GCTATAATGT AGGTCTGGTA
AATGCATTGG ATTACAGTAC TTCCCAAACC AATAAAAATA AAGCAGAAAT AGACATGATC
AGGGCTAAAT ACGACCTGCT TTTCAAAGCA AAGGTGATTG ATTATTACCT GGGTAAACAG
ATTGTTTTTT AA
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| Protein sequence | MKTVISYNTL LKLSFALSFI LLLGQPQKSV AQEVITIQQA IEETLHNNLQ IKQAKLTESL
SDENLSQAKN ALLPTLNGSG SFNTNFGRSL DPSTQSFNSQ KFSSFNGGVS TSVTVFQGFQ
KLNQIKQNKL LLDADKTNVE KIKNDLVLQV VTAYMQILYN KDFLQAAKQQ LTVAQKQLKQ
QQELLDVGNK TLADLAESKS QVATAELDVT TAENALTISY LTLAQLMDIP SSTKYQVKAP
DVANFENSAF IYDPEQVYTD ALSFFPDIKL AGLRSEAAKK GITIAKGNYY PSLSFGAGLN
SNYSSGRQRI TSIQANGFKE IGRTQTTNEA VVTPDFTTFA ENYKFKDQLT DNFGQYVGVR
LEIPIFNGFT ARSSVRKAKI NYQQNQTDEQ LTKNNLNKVI YQAVADLKAA RSTFESSTRT
FNARKEAFSV IEQRYNVGLV NALDYSTSQT NKNKAEIDMI RAKYDLLFKA KVIDYYLGKQ
IVF
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