| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0661 |
|---|
| Symbol | |
|---|
| ID | 8251749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 769941 |
|---|
| End bp | 770558 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644934310 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_003090945 |
|---|
| Protein GI | 255530573 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCTGG TCAAATCACC ACTATTGTTA AAATGGTATT ACCCAAAGTT AACATGGAAT
AAAAACCGCG ATCAAAAAGT TATTTATTTA ACCTTTGACG ATGGACCCAT ACCCGATGTT
ACAGCTTTTG TTTTAAAAAC TTTAAAAAAT TTTGATGCTA AGGCAACTTT TTTTTGCATC
GGTGACAATA TCGTTAAGCA TCCTGATATT TTTGAACAGA TTAAAAGAGC AGGACACCAG
ATTGGCAACC ACACATTTAA CCACCTGAAA GGCTGGATAA CTGAGGACCA ATACTACCTC
GATAATTTTC GGCAATGTCA GGAACTCACG GGTACCAGCT TATTCCGCCC CCCTTATGGC
CGCATCAAAA AATCACAGGC CTCGGGCATC AGGGCTTTAA TGCCGGAAAT GCAGCTGATC
ATGTGGGATG TACTGAGCGG GGACTTTGAC ACCGGCCTAT CGCCCCAAAA GTGCTACCAA
AATGTGATCA GACATACACG TAATGGTTCT ATCATTGTAT TCCACGACAG CCTGAAGGCT
TTTGACAGGC TGGAATATGC TTTGCCCCGC TGCCTGCAGT ATTTTAAGGA AAAGGGTTTT
GAGTTTGCCT TACTCTGA
|
|---|
| Protein sequence | MYLVKSPLLL KWYYPKLTWN KNRDQKVIYL TFDDGPIPDV TAFVLKTLKN FDAKATFFCI
GDNIVKHPDI FEQIKRAGHQ IGNHTFNHLK GWITEDQYYL DNFRQCQELT GTSLFRPPYG
RIKKSQASGI RALMPEMQLI MWDVLSGDFD TGLSPQKCYQ NVIRHTRNGS IIVFHDSLKA
FDRLEYALPR CLQYFKEKGF EFALL
|
|---|
| |