Gene Phep_0655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0655 
Symbol 
ID8251743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp762423 
End bp762896 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content41% 
IMG OID644934304 
Productprotein of unknown function DUF163 
Protein accessionYP_003090939 
Protein GI255530567 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTA CGTTACTGGT TGTAGGGAAG ACAGAGGATA AATACCTGGT TGAGGGGATT 
GAAAAATACC TGAGCAGGCT GAAACACTAT ATTGGTTTTA ACCTGGTAGT GATCCCTGAA
CTGAAGAATA CAAAGAACCT GACAGAGGCC CAGCAAAAAT CAAAGGAAGC AGAGCTGATC
TTAAAGCAGG TCAGTAATCT GGATTCGGTA ATTTTGCTGG ATGAAAAAGG AAAGAAGTAT
ACTTCCGTTT CTTTTTCAAA TTATTTAAAC AAACAGATGA TTGGAAGTGT TCAGCATTTG
GTTTTTATGA TTGGGGGGCC TTATGGTTTT GACGAAAGTA TTTACAGGCG GGCCAACGGC
AGCATGTCGC TGTCAGACAT GACTTTCTCG CATCAGATGG TGCGCTTGTT TTTTGTAGAG
CAGCTTTACA GGGCATTTAG CATATTGAAA GGTGAGCCCT ATCACCACGA ATAA
 
Protein sequence
MKITLLVVGK TEDKYLVEGI EKYLSRLKHY IGFNLVVIPE LKNTKNLTEA QQKSKEAELI 
LKQVSNLDSV ILLDEKGKKY TSVSFSNYLN KQMIGSVQHL VFMIGGPYGF DESIYRRANG
SMSLSDMTFS HQMVRLFFVE QLYRAFSILK GEPYHHE