Gene Phep_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0649 
Symbol 
ID8251737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp759528 
End bp759992 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content48% 
IMG OID644934298 
ProductNUDIX hydrolase 
Protein accessionYP_003090933 
Protein GI255530561 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG4119] Predicted NTP pyrophosphohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA GTTACGGCAT ATTGTTATAC AGGTGGAGAT CGGGCCAACC AGAATTTTTT 
CTGGTGCATC CCGGCGGCCC TTTCTTTGTA AATAAACATG CCGGAAGCTG GACCATCCCT
AAAGGTGAGG CCAACGTGGA CGAAGCCCCA CTACATACGG CCATCAGGGA ATTTGAGGAA
GAAACAGGCT ATCGGCCATC TGGTCATTTT ATTCCATTAA CCCCTATTGT CCAGAAAGGT
GGCAAACAGG TGCATTGCTG GGCCGTTGAA GGCGACCTTG ACGCTACAGC CATCCGCAGC
AACACTTTTG AACTGGAATG GCCGCCACAT TCGGCAAAAA AACAGGTCTT CCCTGAAATA
GATCGTGCAG AATGGCATTG CTTTGAAGAA GCCTGCAAAC TGATCAATGA AAAGCAGCAG
GACCTGTTGC AGCAGTTTAG CAACCTGGCA AAAAACAACA TCTGA
 
Protein sequence
MKQSYGILLY RWRSGQPEFF LVHPGGPFFV NKHAGSWTIP KGEANVDEAP LHTAIREFEE 
ETGYRPSGHF IPLTPIVQKG GKQVHCWAVE GDLDATAIRS NTFELEWPPH SAKKQVFPEI
DRAEWHCFEE ACKLINEKQQ DLLQQFSNLA KNNI