| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0644 |
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| Symbol | |
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| ID | 8251732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 752613 |
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| End bp | 754250 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934293 |
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| Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_003090928 |
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| Protein GI | 255530556 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.440713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAG GATTTTTTAA CGTACCAATC CCTGTTAATG AACCCATTTT GGGTTATGCA
CCTGGAAGTA AAGAACGTGA ACTTTTAATG GCTGCTATAG CCAAGGCCCG TTCAGAACAA
ATAGAAATAC CAATGCACAT TGCGGGGAAA GAGGTCCATA CCAATAATAA AGGAAAGGTT
AGCCCGCCGC ACGATCATCA ACATATTCTG GGACAATACA GCAAAGGTGA TAAAGCACAC
GTAGCCCAGG CTATTGATGC TGCGCTGGCT GCTAAAGCAG ATTGGGAAAA CCTGGCCTGG
GAACACCGCG CCGCCATTTT TTTAAAAGCG GCAGAGCTAA TTGCTGGGCC TTACCGTTAT
AAATTAAATG CCGCCACTAT GCTGGGCCAG AGTAAAAATG CTTACCAGGC TGAAATTGAT
TCGGCATGTG AGCTGATCGA CTTCCTGCGT TTCAACGTAA GTTATATGGC CGACATTTAC
AAACAGCAAC CCCCGGTATC GCCAAAGGGA TCCTGGAACA GGGTTGAACA GCGCCCACTT
GAAGGCTTTG TATTTGCGTT AACTCCTTTT AATTTTACAG CCATTGCCGG AAACCTGCCC
ACATCGGCAG CAATGATGGG TAATGTAGTG GTATGGAAAC CGGCCAATAC ACAGATTTTT
GCAGCCAATG TGCTGATGGA GATTTTTAAG GAAGCGGGAT TACCGGATGG GGTAATTAAC
CTGGTGTATG TTTCAGGCCC TGATGCAGGG GATGTTATTT TTAACCACCC TGATTTTGCC
GGCATACACT TTACCGGTTC TACAGGGGTT TTCCAGAACA TCTGGAAAAC TATAGGCAAC
AATATCCACA AGTTTAAAAC CTATCCGCGA ATAGTTGGTG AAACAGGTGG TAAAGATTTT
ATCCTGGTAC ATGGATCTGC GGAAGCCGAA GCTTCGAGCA CGGCAATTAT CCGTGGAGCA
TTTGAATACC AGGGGCAGAA ATGTTCGGCA GCGTCGCGTG TGTATGTCGC TAAAAGCATC
TGGCCAAAAG TAAAAGAATT TATGCAGCGT GACCTGGCCA CTTTCAAAAT GGGTGGTACT
GAAGATTTCA GCAACTTTAT CAATGCAGTT ATTGATGAGA ATTCTTTTGA TAAACTGGCC
ACATACATTG ACGAGGCAAA GAAAGATAAA GGTGTAGAAA TTATTGCCGG CGGAAACTAT
AATAAGACTA AAGGTTATTT CATTGAACCT ACAGTTCTGG TGGTTGACGA TCCGAAATAC
ACCACCATGT GTGAAGAACT TTTTGGACCG GTTTTAACCG TTTATGTATA TGAAGACAAA
GAATTCGATA AGGTGTTAAA CATGATTGAT ACCACTTCCA TATACGCCTT AACGGGTGCA
GTAATTGCAC AGGACCGTTA TGCTATCGAA AAAGCAACGC ATGCTTTGAG AAATGCGGCC
GGAAATTTTT ACATCAATGA TAAATGTACC GGGGCAGTTG TTGGTCAACA GCCTTTTGGA
GGTGCCAGAG GTTCCGGAAC CAATGATAAA GCCGGATCTA TGATCAATCT TTTACGCTGG
GTATCTCCCC GTGCAATAAA AGAAACTTTT GACCCGCCTA AAGATTACAG GTATCCCTTT
TTAAAAGAGG AAAAATAA
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| Protein sequence | MLKGFFNVPI PVNEPILGYA PGSKERELLM AAIAKARSEQ IEIPMHIAGK EVHTNNKGKV
SPPHDHQHIL GQYSKGDKAH VAQAIDAALA AKADWENLAW EHRAAIFLKA AELIAGPYRY
KLNAATMLGQ SKNAYQAEID SACELIDFLR FNVSYMADIY KQQPPVSPKG SWNRVEQRPL
EGFVFALTPF NFTAIAGNLP TSAAMMGNVV VWKPANTQIF AANVLMEIFK EAGLPDGVIN
LVYVSGPDAG DVIFNHPDFA GIHFTGSTGV FQNIWKTIGN NIHKFKTYPR IVGETGGKDF
ILVHGSAEAE ASSTAIIRGA FEYQGQKCSA ASRVYVAKSI WPKVKEFMQR DLATFKMGGT
EDFSNFINAV IDENSFDKLA TYIDEAKKDK GVEIIAGGNY NKTKGYFIEP TVLVVDDPKY
TTMCEELFGP VLTVYVYEDK EFDKVLNMID TTSIYALTGA VIAQDRYAIE KATHALRNAA
GNFYINDKCT GAVVGQQPFG GARGSGTNDK AGSMINLLRW VSPRAIKETF DPPKDYRYPF
LKEEK
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