Gene Phep_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0639 
Symbol 
ID8251727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp746791 
End bp748332 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content43% 
IMG OID644934288 
Productcarboxyl transferase 
Protein accessionYP_003090923 
Protein GI255530551 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.629685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATA AAATAGAGGT ATTACAGGAT AAGATTAAAC AAGCTCATGC TGGTGGCGGT 
GCTGCAAGGA TTGATAGTCA ACATAAAAAA GGGAAATTAA CAGCCAGGGA AAGGATCCAT
TTTTTAATGG ATGAAAACTC TTTTGAAGAG ATTGGAATGA TGGTTACCCA TAGAAGCACC
GATTTTGGAA TGGAGTCTGA AAAATATCTG GGTGATGGTG TGGTAACAGG CTATGGCAAT
ATTAATGGTC GCCTGGTTTA TGTATTCTCA CAGGATTTTA CCGTATTTGG TGGCTCATTA
TCTGAAACTC ATGCCGAAAA GATCTGTAAA ATTATGGACA TGGCCATGAA AAATGGGGCG
CCGGTTATTG GCTTAAATGA CAGTGGTGGT GCACGCATAC AGGAAGGTGT GGTTTCATTG
GGCGGATATG CCGATATATT TTACAAGAAC GTTCAGGCTT CAGGAGTAGT GCCCCAGCTG
TCTGCCATTA TGGGGCCCTG TGCCGGGGGT GCTGTATATT CCCCGGCCAT TACAGATTTT
ATTTTAATGG TTGAAAATAC TTCTTACATG TTTGTTACGG GGCCAAATGT GGTTAAAACG
GTAACCCATG AAGAAGTAAG CGCTGAAGAA CTTGGAGGGG CATCTGCACA TGCAACTAAA
TCTGGTGTAA CGCATTTTGC ATGCGCAAAT GAACTGGATG CCATTGATCA TGTTAGAAGG
TTACTGAGCT ATATGCCGCA AAACTGCGAG GAAATTCCGG CACGGCTACC TTATGAAGCA
ACAGACGAAA ACAGGGCAGT GTTGAACGAC ATCATGCCCC AAAATGCCAA TCAGCCTTAT
GATGTAAGGG GTATAATTGC AGAAACAGCA GATAGCGAGA GTTTTTTAGA AGTGCATGCC
GCTTATGCAG AGAACATAGT AGTCGGTTTT GCCCGTTTAG CAGGCAGAAG TATCGGTATT
GTAGCCAACC AACCGGCTTA CCTGGCCGGG GTTTTAGACA ACCACGCCTC TGCCAAAGCC
GCAAGGTTTG TACGCTTTTG CGACTGTTTT AATATCCCTC TGCTTGTTTT TGAAGATGTA
CCAGGTTTTT TACCGGGAAC GGATCAGGAA TGGAATGGCA TCATTAACAA TGGGGCTAAG
CTACTTTATG CCTTTAGTGA GGCCACAGTA CCCCGTATTA CCGTAATTAC AAGAAAAGCT
TATGGCGGTG CTTACGATGT AATGAACTCC AAGCATATTG GTGCCGATTT AAATTATGCC
TGGCCAACTG CTGAAATAGC AGTTATGGGT GCAAAAGGGG CTGCCGAAAT TATCTTTAAA
AAAGAGATCA GCACAGCTGA AAAGCCTGAA GAAAAATGGC TGGAGAAAGA AAAACTTTAT
TCGGACACTT TTGCCAATCC TTACCGCGCA GCAGAACGGG GATTTATAGA TGAGGTGATA
GAACCCGCTC AAACCAGGAA TAAGCTGATC AAGGCTTTTA AAATGTTAGA AAACAAGGTG
GTGAACAACC CCCGTAAAAA ACACGGAAAT ATCCCTTTAT AA
 
Protein sequence
MKNKIEVLQD KIKQAHAGGG AARIDSQHKK GKLTARERIH FLMDENSFEE IGMMVTHRST 
DFGMESEKYL GDGVVTGYGN INGRLVYVFS QDFTVFGGSL SETHAEKICK IMDMAMKNGA
PVIGLNDSGG ARIQEGVVSL GGYADIFYKN VQASGVVPQL SAIMGPCAGG AVYSPAITDF
ILMVENTSYM FVTGPNVVKT VTHEEVSAEE LGGASAHATK SGVTHFACAN ELDAIDHVRR
LLSYMPQNCE EIPARLPYEA TDENRAVLND IMPQNANQPY DVRGIIAETA DSESFLEVHA
AYAENIVVGF ARLAGRSIGI VANQPAYLAG VLDNHASAKA ARFVRFCDCF NIPLLVFEDV
PGFLPGTDQE WNGIINNGAK LLYAFSEATV PRITVITRKA YGGAYDVMNS KHIGADLNYA
WPTAEIAVMG AKGAAEIIFK KEISTAEKPE EKWLEKEKLY SDTFANPYRA AERGFIDEVI
EPAQTRNKLI KAFKMLENKV VNNPRKKHGN IPL