Gene Phep_0638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0638 
Symbol 
ID8251726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp745628 
End bp746791 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content45% 
IMG OID644934287 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003090922 
Protein GI255530550 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGA AACGGTCTGA TGTTTTATTG ATGGCCTTTT GCACAGGGCT TATTGTTGCC 
AATATTTACT ATTGCCAGCC ATTGGTCATA CTGGTAGCCC GTGAGTTTAA CCTGACAGAA
AGTTATGCCG GCCGGATCAC CTATCTGACA CAGGCCGGCT ATGCACTGGG CCTGTTCTTA
ATTGTCCCGC TGGGTGACAT GTTTGAACGC CGCAGACAAA TACTGCTGAT TACAGCTATA
GCTATAGCCG CATTGTTGCT GACAGCGCTT GCTCATACTT TCCTGCTGTT GCAGGTGGCC
AGCGTATTAA TTGGGGCCAG TTCCATCATC CCACAGTTAA TTTTACCGAT GGCGGCCAAC
CTCAGCTCCA ATGAAAAAAG GGGTCAGACA ATTGGTGTGA TCATGAGCGG CTTGCTGATA
GGGATACTTG CATCCAGGGC ATTGAGTGGT AGTGTGGGGT ATTTATGGGG CTGGCGTACC
ATGTATTTTA TTGCCGCAGG TATCTGCTCG CTCCTTTTAT TATTAATGGC CAAACGCTTT
CCGCAAAGCA GACCAGCTTT TAATGGTAGC TACAAAGCAC TGATGTTATC CATGTGGCAT
TATATCAAAA CACAACCTGT TCTTCGTGAA GCCTCAATTA TTAATTTTTT GGCTTTTGCT
ATACTTAGTG GCTTCTGGAC TACTATGGTA TTGTTCCTGG CCAATCCGCC TTTTGGTTTT
CAAAGTCTGC AGATCGGCTT ATTTGGCATT GCAGGTGCTG CCGGGGCCAT GGCTGCTCCA
TTGGTAGGTA AACTGAGCAC TGGTAAAAAT CCGCGCAAAA ACCTCTTAAC AGGACTTATT
TTACAGTTAA TCAGTATTGC TGCCTTTTAT TTTACTGGCA GCCATCTATA TCTGTTTGTT
GCCGGAATAA TTTTGATTGA CATAGGGCAA CAGGCCATTC ATGTTACCAA CCAAACCAGG
ATTTATGCAT TGGTTCCCGA AGCACGCAAC CGACTGAATA CTATTTTTAT GTCTGTCAGT
TTTGTCGGTG CATCAGTTGG CTCAGCATTT GGCTTATGGC TATGGGAAAA AGGCCAGTGG
CCATTATTTT GTCTGGGCAC GGCTTTGGTT GTTGGGTTAA ATATATTAAT TTACAATTTT
TACAGCCACA AGCTTAAAAC CTGA
 
Protein sequence
MELKRSDVLL MAFCTGLIVA NIYYCQPLVI LVAREFNLTE SYAGRITYLT QAGYALGLFL 
IVPLGDMFER RRQILLITAI AIAALLLTAL AHTFLLLQVA SVLIGASSII PQLILPMAAN
LSSNEKRGQT IGVIMSGLLI GILASRALSG SVGYLWGWRT MYFIAAGICS LLLLLMAKRF
PQSRPAFNGS YKALMLSMWH YIKTQPVLRE ASIINFLAFA ILSGFWTTMV LFLANPPFGF
QSLQIGLFGI AGAAGAMAAP LVGKLSTGKN PRKNLLTGLI LQLISIAAFY FTGSHLYLFV
AGIILIDIGQ QAIHVTNQTR IYALVPEARN RLNTIFMSVS FVGASVGSAF GLWLWEKGQW
PLFCLGTALV VGLNILIYNF YSHKLKT