Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0638 |
Symbol | |
ID | 8251726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 745628 |
End bp | 746791 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644934287 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003090922 |
Protein GI | 255530550 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTGA AACGGTCTGA TGTTTTATTG ATGGCCTTTT GCACAGGGCT TATTGTTGCC AATATTTACT ATTGCCAGCC ATTGGTCATA CTGGTAGCCC GTGAGTTTAA CCTGACAGAA AGTTATGCCG GCCGGATCAC CTATCTGACA CAGGCCGGCT ATGCACTGGG CCTGTTCTTA ATTGTCCCGC TGGGTGACAT GTTTGAACGC CGCAGACAAA TACTGCTGAT TACAGCTATA GCTATAGCCG CATTGTTGCT GACAGCGCTT GCTCATACTT TCCTGCTGTT GCAGGTGGCC AGCGTATTAA TTGGGGCCAG TTCCATCATC CCACAGTTAA TTTTACCGAT GGCGGCCAAC CTCAGCTCCA ATGAAAAAAG GGGTCAGACA ATTGGTGTGA TCATGAGCGG CTTGCTGATA GGGATACTTG CATCCAGGGC ATTGAGTGGT AGTGTGGGGT ATTTATGGGG CTGGCGTACC ATGTATTTTA TTGCCGCAGG TATCTGCTCG CTCCTTTTAT TATTAATGGC CAAACGCTTT CCGCAAAGCA GACCAGCTTT TAATGGTAGC TACAAAGCAC TGATGTTATC CATGTGGCAT TATATCAAAA CACAACCTGT TCTTCGTGAA GCCTCAATTA TTAATTTTTT GGCTTTTGCT ATACTTAGTG GCTTCTGGAC TACTATGGTA TTGTTCCTGG CCAATCCGCC TTTTGGTTTT CAAAGTCTGC AGATCGGCTT ATTTGGCATT GCAGGTGCTG CCGGGGCCAT GGCTGCTCCA TTGGTAGGTA AACTGAGCAC TGGTAAAAAT CCGCGCAAAA ACCTCTTAAC AGGACTTATT TTACAGTTAA TCAGTATTGC TGCCTTTTAT TTTACTGGCA GCCATCTATA TCTGTTTGTT GCCGGAATAA TTTTGATTGA CATAGGGCAA CAGGCCATTC ATGTTACCAA CCAAACCAGG ATTTATGCAT TGGTTCCCGA AGCACGCAAC CGACTGAATA CTATTTTTAT GTCTGTCAGT TTTGTCGGTG CATCAGTTGG CTCAGCATTT GGCTTATGGC TATGGGAAAA AGGCCAGTGG CCATTATTTT GTCTGGGCAC GGCTTTGGTT GTTGGGTTAA ATATATTAAT TTACAATTTT TACAGCCACA AGCTTAAAAC CTGA
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Protein sequence | MELKRSDVLL MAFCTGLIVA NIYYCQPLVI LVAREFNLTE SYAGRITYLT QAGYALGLFL IVPLGDMFER RRQILLITAI AIAALLLTAL AHTFLLLQVA SVLIGASSII PQLILPMAAN LSSNEKRGQT IGVIMSGLLI GILASRALSG SVGYLWGWRT MYFIAAGICS LLLLLMAKRF PQSRPAFNGS YKALMLSMWH YIKTQPVLRE ASIINFLAFA ILSGFWTTMV LFLANPPFGF QSLQIGLFGI AGAAGAMAAP LVGKLSTGKN PRKNLLTGLI LQLISIAAFY FTGSHLYLFV AGIILIDIGQ QAIHVTNQTR IYALVPEARN RLNTIFMSVS FVGASVGSAF GLWLWEKGQW PLFCLGTALV VGLNILIYNF YSHKLKT
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