| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0629 |
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| Symbol | |
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| ID | 8251717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 735771 |
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| End bp | 736763 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644934278 |
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| Product | DNA-directed RNA polymerase, alpha subunit |
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| Protein accession | YP_003090913 |
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| Protein GI | 255530541 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.946637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATTT TAGCATTTCA GAAACCCGAT AAAGTAATCA TGCAGAAATC AACTGATTTC
GATGGTACAT TTGAGTTCCG TCCTTTAGAG CCCGGTTTCG GTGTAACAAT TGGTAATGCC
TTGAGAAGAA TATTGCTTTC TTCTTTAGAA GGTTATGCCA TTACAAGTAT TCGTTTTTCA
GGGGTATCTC ATGAGTTTTC TACCATAAAA GGCGTTGTAG AAGATTTAAC AGAAATCATT
CTTAATTTAA AACAAGTGCG TTTTAAAAAA TCAGGAGATG CCGGTGACTC AGAGAAAGTT
TTTATTTTAG TTAATGGACA GGAGCAGTTT GTTGCTGGCG ACATTACTAA ATTCTCTAAT
AACTTCGAGG TGCTTAACCC TGATTTCGTT ATTTGTAACA TGGAGAAATC TGTTACTTTA
GAAGTGGAAT TGACCATTAA TAAAGGACGT GGTTATGTAC CTGCAGAAGA GAATAAAATA
AATGATGCTG TTGTTGGTGT GATCGCAATC GATTCGATTT TCACGCCAAT GAAAAATGTA
AAGTACACTA TAGAAAACTA TCGTGTTGAA CAGAAAACAG ATTATGAAAA ATTAATATTG
GATATCTCTA CAGATGGCTC AATCCATCCG GAAGAAGCAT TAAAGGAAGC TGCGAAAATC
TTAATCCAGC ATTTTATGCT TTTCTCTGAT GAGAATTTGG TATTGGAGTC TCAGGCGAAA
GAAGAAACGA AAGAGGTTGA TGAGGAAATC TTGCACATGC GTAAGATCTT AAAAACTGAA
TTGGTTGATT TAGATCTTTC AGTACGTGCA TTGAACTGCT TAAAGGCAGC TGATATCCGT
ACGCTTGCTG ATCTGGTTTC TTATGATGTG GCTGATATGT TGAAATTCAG AAACTTCGGT
AAAAAATCCT TAACTGAGAT CCAGGAACTT GTTAAATCTA AAAGTTTATC GTTTGGTATG
AACTTGTCTA AGTTTAAACT GGACGAAGAA TAA
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| Protein sequence | MAILAFQKPD KVIMQKSTDF DGTFEFRPLE PGFGVTIGNA LRRILLSSLE GYAITSIRFS
GVSHEFSTIK GVVEDLTEII LNLKQVRFKK SGDAGDSEKV FILVNGQEQF VAGDITKFSN
NFEVLNPDFV ICNMEKSVTL EVELTINKGR GYVPAEENKI NDAVVGVIAI DSIFTPMKNV
KYTIENYRVE QKTDYEKLIL DISTDGSIHP EEALKEAAKI LIQHFMLFSD ENLVLESQAK
EETKEVDEEI LHMRKILKTE LVDLDLSVRA LNCLKAADIR TLADLVSYDV ADMLKFRNFG
KKSLTEIQEL VKSKSLSFGM NLSKFKLDEE
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