| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0622 |
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| Symbol | |
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| ID | 8251710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 731583 |
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| End bp | 732917 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644934271 |
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| Product | preprotein translocase, SecY subunit |
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| Protein accession | YP_003090906 |
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| Protein GI | 255530534 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.925436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAGC TGTTTACTAC TTTAAGTAAT ATTTGGAAAA TTCAAGAATT GAAAGAGCGT
ATTATTTTTA CGCTCATGAT TCTTTTAGTT TATAGGTTTG TATCTCATGT GGTATTACCA
GGTGTAGATG CAACACTTTT AGGCGATAAT ACGAAGTCTG GCATTTTAGG TCTGTTGGAT
ATGTTTGCGG GAGGATCATT TTCCCGGGTA TCTATCCTGG CCTTGGGTGT TATGCCTTAT
ATTTCTGCCT CTATTGTAGT TCAGCTATTA GGTATTGCGG TTCCTTCTTT TCAGAAGATG
CAAAAGGAAG GTGAGAGCGG AAGAAAGAAA CTCAATCAGA TTACCCGTTA TTTAACCGTA
GCCATTACAG CTGTTCAGGC TGTGGGTTAT GTTAAAACAC AGGTTCCAGC TGAGGCTATC
ATTATAGACC ACACCTTATT TTTTGTGCTT GCAACATTTG TTTTATCTGC AGGTACATTA
TTTGTAATGT GGTTAGGTGA GAAAATCACT GACAAAGGTA TTGGTAATGG TATATCACTG
ATCATTATGG TTGGTATTAT TGCCCGTTTG CCTATTGCGC TGCAACAGGA GATCAGTTCA
AGGTTTGTAG GTGACGGGGG CTTAATTGCC CTGGTTGTTG AGATTGTTGC GCTTTTTGCT
GTTGTAATGT TTACGATCAT GATTGTACAG GGCGTTCGTA AAGTGCCTGT ACAATATGCA
AAAAGGATTG TAGGCAACAG ACAGTTTGGT GGGGTTAGGC AGTATATACC TTTAAAAGTA
AATGCTGCTG GTGTGATGCC GATCATTTTT GCCCAGGCAT TAATGTTTAT TCCCGCAACT
TTGACAGGAT TTTTTCCATC CTTGCAGAAT ACCTGGCTGA TTCAGTTTAG TGATTATACT
TCTTTGGCCT ATAGTTTAAC GTTTGCATTT TTAATTATTG CATTTACATT TTTCTATACT
GCGATTACAG TTAATCCTAC TCAGATGTCT GATGACATGA AAAAGAATGG TGGGTTTATA
CCGGGCATAA AACCGGGTTT ATCTACTTCA TCATTTATTG ATGATGTGAT TTCCAAGATC
ACCTTTCCAG GAGCAGTTTT CCTGGCGATC ATTGCAATTC TTCCTTCTAT TGCAGTTAAA
TTTGGGATTA AATCTGAGTT TGCACATTTT TATGGAGGAA CGTCTTTGCT GATTCTGGTA
GGGGTTGTTC TAGATACCTT ACAACAGATT GAGAGTTATT TATTAATGCG TCATTACGAT
GGATTAATGA AAACAGGTAG GGTTACTGGT CGTACGGGAA TTCCTGCAGC GAGTGGTAGC
AATGCTGTGA TTTAG
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| Protein sequence | MKKLFTTLSN IWKIQELKER IIFTLMILLV YRFVSHVVLP GVDATLLGDN TKSGILGLLD
MFAGGSFSRV SILALGVMPY ISASIVVQLL GIAVPSFQKM QKEGESGRKK LNQITRYLTV
AITAVQAVGY VKTQVPAEAI IIDHTLFFVL ATFVLSAGTL FVMWLGEKIT DKGIGNGISL
IIMVGIIARL PIALQQEISS RFVGDGGLIA LVVEIVALFA VVMFTIMIVQ GVRKVPVQYA
KRIVGNRQFG GVRQYIPLKV NAAGVMPIIF AQALMFIPAT LTGFFPSLQN TWLIQFSDYT
SLAYSLTFAF LIIAFTFFYT AITVNPTQMS DDMKKNGGFI PGIKPGLSTS SFIDDVISKI
TFPGAVFLAI IAILPSIAVK FGIKSEFAHF YGGTSLLILV GVVLDTLQQI ESYLLMRHYD
GLMKTGRVTG RTGIPAASGS NAVI
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