Gene Phep_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0620 
Symbol 
ID8251708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp730838 
End bp731017 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content37% 
IMG OID644934269 
Productribosomal protein L30 
Protein accessionYP_003090904 
Protein GI255530532 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.752078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGA TCAAAATAAC CCAGGTAAAA AGCATTATCG ACAGAAGTGA GCGCCAGAAA 
AGAACAATGC AAGCTTTAGG TTTAACTAAA ATGAACCAAA GTGTAGAAGT TGAGGCAACT
GATGCCATTA TTGGAATGGT AAGAAAAGTG AATCACTTAA TCGCGATAGA GCGCATATAA
 
Protein sequence
MAKIKITQVK SIIDRSERQK RTMQALGLTK MNQSVEVEAT DAIIGMVRKV NHLIAIERI