Gene Phep_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0616 
Symbol 
ID8251704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp728963 
End bp729361 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content35% 
IMG OID644934265 
Productribosomal protein S8 
Protein accessionYP_003090900 
Protein GI255530528 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.998954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAG ATCCAATAGC AGATTATCTT ACAAGAGTAA GAAATGCCAT AAAGGCAAAT 
CACAGAATTG TAGAGATTCC TGCATCAAAC CTTAAAAAGG AAATTACTAA AGTACTTTTT
GACAAAGGTT ACATTGCTAA CTACAAATTT GAGGATACTA CAACTCAAGG CACTATTAAA
ATTGCATTGA AGTACAATGC GATCACTAAA ATCCCGGCGA TCCGTACGTT AACACGTATT
AGCAAACCAG GTTTAAGGCA ATATGCCGGT GTGGATAATA TGCCAAGAGT ATTAAATGGT
TTAGGTATTG CAATTTTATC TACATCTAAG GGTGTTATGA CCGATAAAGA GGCTGCTAAA
CTAAACATTG GTGGCGAAGT TTTGTGTCAC GTTTATTAA
 
Protein sequence
MNTDPIADYL TRVRNAIKAN HRIVEIPASN LKKEITKVLF DKGYIANYKF EDTTTQGTIK 
IALKYNAITK IPAIRTLTRI SKPGLRQYAG VDNMPRVLNG LGIAILSTSK GVMTDKEAAK
LNIGGEVLCH VY