Gene Phep_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0600 
Symbol 
ID8251688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp720993 
End bp721829 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content43% 
IMG OID644934249 
Productprotein of unknown function DUF81 
Protein accessionYP_003090884 
Protein GI255530512 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTAT TACTCTTCAC AATCATCGTT TTGGCAGGGG CTTTTTTAGC CGGACTGGTT 
GGCTCACTGA CAGGACTTGG AGGTGGGGTG ATCATTATTC CACTGTTAAC ACTTGTGCTT
GGCGTTGACA TTCATTATGC TATTGGTGCA TCTATTATAT CTGTGATCGC GACTTCATCG
GGTTCGGCGG CAGCCTATGT TAAAGAAGGG ATTACGAATA TACGGATAGG GATGTTTCTG
GAAATAGCGA CTACAATAAG CGCCATTATC GGAGCTGTGG TTACTGTATT TATCAATCCA
AGTTATATAG CTGTTATTTT TGGACTGATC CTTTTGTTCT CTGCCGTAAT GATGGTAAGG
AAGAAAGTAG ACCATTCTGA TAACGATACT TCGGGCAAAC TGGCTGTTTT CTTGAAATTG
AACGGCACTT ACCCTGTTGA TGGAACTGTT AAAAAATATG CAGTGCATAA TGTGCTGGGT
GGTTTTTTAA TGATGTTTGT GGCTGGTATC ATTTCAGGTT TGCTGGGGAT TGGCTCGGGC
GCCCTGAAGG TGGTGGCTAT GGATAACATC ATGCGGATCC CTTTTAAGGT CTCGACTACC
ACCAGCAATT TTATGATGGG GGTTACGGCA GCGGCAAGTG CAATTGTTTA CCTGCATCGC
GGACAGATTG ATCCGGGGAT TGCCATGCCT GTAACCATAG GTGTATTATT TGGGGCTACA
ATCGGATCAA AGATTCTGGT GAGGACCAAT ACAGATAAAT TAAAGGTGGT TTTTGCAGTG
GTGGTTACTT TTTTAGCACT TCAAATGATT TATAATGGCT TATCGGGCAG ATTATGA
 
Protein sequence
MSVLLFTIIV LAGAFLAGLV GSLTGLGGGV IIIPLLTLVL GVDIHYAIGA SIISVIATSS 
GSAAAYVKEG ITNIRIGMFL EIATTISAII GAVVTVFINP SYIAVIFGLI LLFSAVMMVR
KKVDHSDNDT SGKLAVFLKL NGTYPVDGTV KKYAVHNVLG GFLMMFVAGI ISGLLGIGSG
ALKVVAMDNI MRIPFKVSTT TSNFMMGVTA AASAIVYLHR GQIDPGIAMP VTIGVLFGAT
IGSKILVRTN TDKLKVVFAV VVTFLALQMI YNGLSGRL