Gene Phep_0598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0598 
Symbol 
ID8251686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp719931 
End bp720236 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content37% 
IMG OID644934247 
Productribosomal protein S10 
Protein accessionYP_003090882 
Protein GI255530510 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.945265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAA GAATCAGAAT CAAATTAAAA TCTTACGATT ATAATCTGGT AGATAAGTCT 
GCCGAGAAAA TCGTAAAAAC TGTTAAGCCG ACAGGTGCAG TGGTTAGCGG ACCAATTCCC
TTGCCTACAG AGAAGAAAAT TTTCACTGTT TTGCGTTCAC CACACGTGAA CAAAAAAGCA
CGTGAGCAGT TCCAATTGTG TGCTTATAAG CGTTTGTTAG ATATTTATAG CTCTAACTCA
AAAACAGTAG ACGCTTTAAT GAAACTTGAA TTGCCTAGCG GTGTTGAAGT AGAAATCAAA
GTATAA
 
Protein sequence
MSQRIRIKLK SYDYNLVDKS AEKIVKTVKP TGAVVSGPIP LPTEKKIFTV LRSPHVNKKA 
REQFQLCAYK RLLDIYSSNS KTVDALMKLE LPSGVEVEIK V