Gene Phep_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0596 
Symbol 
ID8251684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp717267 
End bp717734 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content38% 
IMG OID644934245 
Product30S ribosomal protein S7 
Protein accessionYP_003090880 
Protein GI255530508 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.370718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGT CAAAACCAAA AAAGAGAATT ATCCTTCCTG ATCCAAAATT TAACGACGTT 
CAGGTAACAA GGTTTGTAAA CAATATGATG TTTGATGGAA AAAAATCTAT CGCTTATTCT
ATTTTTTACG ATGCTGTTGA ACTTGCTGAG AAAAAAGCAG GTGAAAATGG TTTAGAAGTG
TGGAAACGTG CTTTATCTAA CGTGATGCCA GCTGTTGAGG TAAAATCACG CCGTGTAGGT
GGTGCAAACT TCCAGGTTCC TACCGAGGTA AGACCTGACC GCAAGATTGC ATTGGGCATG
AAATGGTTAA TTTCATATGC ACGCAAACGT GGTGAAAAAA CAATGAAAGA AAAATTAGCA
GGTGAAATTG TTTCAGCAGC TAAAGGTGAA GGTGCAGCGG TTAAGAAAAA AGAAGATACG
CATAAAATGG CTGAAGCTAA TAAAGCGTTC TCTCATTTCC GTTTCTAA
 
Protein sequence
MRKSKPKKRI ILPDPKFNDV QVTRFVNNMM FDGKKSIAYS IFYDAVELAE KKAGENGLEV 
WKRALSNVMP AVEVKSRRVG GANFQVPTEV RPDRKIALGM KWLISYARKR GEKTMKEKLA
GEIVSAAKGE GAAVKKKEDT HKMAEANKAF SHFRF