Gene Phep_0589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0589 
Symbol 
ID8251677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp711735 
End bp713249 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content42% 
IMG OID644934238 
Producthistidine kinase internal region 
Protein accessionYP_003090873 
Protein GI255530501 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAA AAGATCTTTC AAAAATAGAA TTCTGGGTTG CTACAGGCCT TTATGGCTTC 
GCCATTTTAT TACTGATCTC CAACTCCGGA GAAAGAACAC CCAACCATAC GGAGTCCCTC
ATGAAAGGAG CAAATCTGCA CTATTCCTAT ATCTCCAATT ACCTGTTCCC TGAATTGTTC
CGTTTTTCTA TTTTGTACTT CAGCTTTTTG CTCTTAAACT TTTGTATCCT GCCCGCCTTG
TTTAAGCCGA AAGACAGGGC CATGGCAATA ATCATGCTAA TTTGCCTGTT TCTGGTAACC
GGACTGGTTA CCAGCGTTGT TTATACCTAT AGTAAGGAAT ATATGTTTTC TGACTTTAGT
ACCTTAAACG AGGCTTATAA TTATTTTTTT CTCAGAGGAT TTAGCTACTC CACCTGGCTG
ATTCTGATCA TCGGCATTTA CGCGGCCCTT AAAAAACTGA TCATCTATTT TAACGATAAT
GACAGCCTTC AGTATGAACC CAATAACCGC ATGAAGCTGG AGGCAGTATT TGGCGGCGCA
TTCTGGTTTG TAGGCCTGCT CCTGCTGATT GCAGGTCACG GCAATTTTGC AGTAATGTTA
TGCTGGACAC TGGTTACCTG CTCCACTGTT TGCATCATCA TCTTTTCCAT TTATTACCTC
ATTCCTCAGG TAAAACGTGA AGGCAAGACC TTTCGTCACT ATTTTTGGAA AATATGCTTA
ATTGCTATCC TATCCAGTGT GCCACTGGTC CTGCTCGCAC TCCTGTATAA TAACCGTGCG
GAAATGGCTG TAGCAGTTAT CGCCTTTCAT GTCCCCACTC AACTCATTGT CAGTACATCC
CTATCCTGGT TTATTTACAA AAAACGCAGT GCCACCCATG CAGAACTGAC CAGTTTAAAA
ACAGAACTCG GCCGCTCAGA TGCCAGTTTA AGTTTCCTCC GTTCGCAAAT CAATCCGCAT
TTCTTATTCA ATGCATTAAA TACCCTTTAT GGAACTGCTT TACAGGAAAA AGCCGAACGC
ACAGGAGAAG GCATACAAAA ACTGGGCGAC ATGATGCGTT TCATGCTACA GGAAAACCTT
CAGGATAAAA TTTCTTTAAC ACGCGATATA GACTACCTCA ACAATTACAT CGCCCTCCAA
AAACTCAGGA CTTCCCCTTC ATCCTCAATA GTGATCGAAA CCCAGATTGA TGAGCAGTTA
AACAATCTTG TCATTGCCCC CATGCTTTTG ATCCCCTTTG TAGAGAATGC ATTTAAACAC
GGGATCAGTC TGCAGGAGCC ATCCCATATA AAAATCACTT TGCAGACTAA AGAAAGTACC
CTATATTTTG ATGTACAGAA TTCCATCCAT TTAAAAGGCG ACAATGATCC CGAGAAACTG
CAAAGCGGTA TCGGCCTGCA AAACGTAAAA CGCCGGCTAA CACTGCTTTA TCCAAATCAG
CACGAACTCC TCATCCGTGA AAGCGCTACA ACGTTTTTTA TCCACCTTAC CCTGCAATTA
CAAAGAAATA GTTAA
 
Protein sequence
MKLKDLSKIE FWVATGLYGF AILLLISNSG ERTPNHTESL MKGANLHYSY ISNYLFPELF 
RFSILYFSFL LLNFCILPAL FKPKDRAMAI IMLICLFLVT GLVTSVVYTY SKEYMFSDFS
TLNEAYNYFF LRGFSYSTWL ILIIGIYAAL KKLIIYFNDN DSLQYEPNNR MKLEAVFGGA
FWFVGLLLLI AGHGNFAVML CWTLVTCSTV CIIIFSIYYL IPQVKREGKT FRHYFWKICL
IAILSSVPLV LLALLYNNRA EMAVAVIAFH VPTQLIVSTS LSWFIYKKRS ATHAELTSLK
TELGRSDASL SFLRSQINPH FLFNALNTLY GTALQEKAER TGEGIQKLGD MMRFMLQENL
QDKISLTRDI DYLNNYIALQ KLRTSPSSSI VIETQIDEQL NNLVIAPMLL IPFVENAFKH
GISLQEPSHI KITLQTKEST LYFDVQNSIH LKGDNDPEKL QSGIGLQNVK RRLTLLYPNQ
HELLIRESAT TFFIHLTLQL QRNS