| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0583 |
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| Symbol | |
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| ID | 8251671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 703808 |
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| End bp | 704386 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644934232 |
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| Product | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 |
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| Protein accession | YP_003090867 |
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| Protein GI | 255530495 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA TCGCAATTAG CGGTTCTCCA AGAGAGAACG TAGGGAAACG CGATGCTAAA
GAGCTTCGCT ACGAAGGTAA AGTTCCCGCA GTATTGTATG GTGGCAAAGA GCAAGTGCAC
TTTGCTGTAG TAATCGCAGA TTTAAGGGAT GCTATTTACA CTCCGGAAGC GAATTTTGTA
GAAATTGCCA TCAATGGCAA TAAAATTAAA GCAATCATTA AAGAATTGCA ATTTCACCCA
TTAACAGATG TATTGTTACA CGTAGATTTT CTTCAGTTGT TTGACGATAA GGAAATCTTA
ATGGAAATCC CTGTTAAATT GACCGGTACT TCTCCAGGTG TTAAAATGGG TGGTAAACTG
GTTCAGAAAT TACGTAAACT TCGTGTTAAG GCTTTCCCTA AAGATATGCC TCAGGCTGTA
GAAGTAAGTA TTGCTAAATT AGAAGTTGGT AACCTGTTCC GTGTACGTGA TCTTGAGAAA
GGCAAATACA CAGTAACCAA TACAGGTGAA GATACTATCG TTTCTGTAGG TATGTCAAGA
GCATTGAAGC AAGCAGAACA AGAGGCTAAC AAAAAATAA
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| Protein sequence | MKTIAISGSP RENVGKRDAK ELRYEGKVPA VLYGGKEQVH FAVVIADLRD AIYTPEANFV
EIAINGNKIK AIIKELQFHP LTDVLLHVDF LQLFDDKEIL MEIPVKLTGT SPGVKMGGKL
VQKLRKLRVK AFPKDMPQAV EVSIAKLEVG NLFRVRDLEK GKYTVTNTGE DTIVSVGMSR
ALKQAEQEAN KK
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