Gene Phep_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0580 
Symbol 
ID8251667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp697671 
End bp698633 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content43% 
IMG OID644934228 
Productacetyl-CoA carboxylase, carboxyl transferase, alpha subunit 
Protein accessionYP_003090864 
Protein GI255530492 
COG category[I] Lipid transport and metabolism 
COG ID[COG0825] Acetyl-CoA carboxylase alpha subunit 
TIGRFAM ID[TIGR00513] acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGA TAAAAACATC ATTTGATTTT GAAAAGCCTA TTGCTGAGCT GGAACAGCAA 
ATTGAAAAGG TTAAACAAGT TGCCGATAAA ACCAAAGTAG ATATGTCTGC TACCTTAACT
GAACTTGAAG AAAAGCTGGA CAAGACCCAG CAAACACTAT ATAGCAACCT TACGGGGTGG
CAAAAAGTTC AAATGTCCCG TCATCCTGAA AGACCGCAGA CCCTTGATTA TGTCAGTATG
ATCTGTGATG ATTTTATTGA GATGCATGGC GACAGGACCG TTAAAGATGA CAAGGCTATT
ATTGGTGGTT TTGCAACTAT AGATGGCCAG ACCGTAATGA TCATTGGACA CCAGAAAGGT
AAAAACACCA AAGAGCGGCA ATACCGGAAT TTTGGTATGG CCAATCCGGA AGGTTATAGA
AAAGCACTTC GGCTGATGCG CCTTGCCGAA AAGTTCAATA AGCCTGTGAT CTCTTTTATT
GATACCATGG GAGCCTACCC GGGCCTTGAG GCAGAAGAAC GCGGACAAGG AGAGGCCATT
GCCCGCAACT TGCTGGAAAT GTCGGTACTA AAGGTGCCTA TTTTGTGCTT TGTAGTAGGT
GAAGGTGCTT CTGGTGGGGC CTTGGGTATT GGTATTGGCG ACAGGGTGTA CATGCTTGAG
CATACCTGGT ATTCGGTCAT CTCTCCAGAA TCCTGCTCAT CTATCCTTTG GAGAAGCTGG
GATTATAAGG AACGCGCTGC TGAATGCCTG AAACTGACAT CTGAAGATAT GTTTAAAAAT
AAACTGATCG ACGGAATTAT TAAAGAGCCA CTGGGCGGTG CACATCAAAA TCCTGAACTG
ATGGCACAAA CTTTAAAGCA ACAGATCCTG GATGATCTGA AAGTATTAAA GAAAGAGAAA
ACAGAAAAGA TGATCACTGC CAGGATTGAT AAATTCTGTG CAATGGGGGT TGTTAATGAG
TAA
 
Protein sequence
MEQIKTSFDF EKPIAELEQQ IEKVKQVADK TKVDMSATLT ELEEKLDKTQ QTLYSNLTGW 
QKVQMSRHPE RPQTLDYVSM ICDDFIEMHG DRTVKDDKAI IGGFATIDGQ TVMIIGHQKG
KNTKERQYRN FGMANPEGYR KALRLMRLAE KFNKPVISFI DTMGAYPGLE AEERGQGEAI
ARNLLEMSVL KVPILCFVVG EGASGGALGI GIGDRVYMLE HTWYSVISPE SCSSILWRSW
DYKERAAECL KLTSEDMFKN KLIDGIIKEP LGGAHQNPEL MAQTLKQQIL DDLKVLKKEK
TEKMITARID KFCAMGVVNE