Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0576 |
Symbol | |
ID | 8251663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 693230 |
End bp | 694132 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644934224 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_003090860 |
Protein GI | 255530488 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAATA TAATCTGTGT AACCAGCCTG GCGCTGTTAA GCCTGTCGGG ATGTAAAACC ATGCAAAACA CCAAGTCAAT CACCAAAGCT GAATTCCCGG CTTTCAGCAC CGAAGCCCAT AGGGGGGGCA GGGGGCTAAT GCCCGAAAAT ACCATTGTAG CGATGCGCAA TGCCATCGAT ATTGGGGTAA CTACCCTCGA AATGGATACC CATATCACCA AAGATGGCCA GGTGGTGGTT ACACACGACG ATTACCTGAG CCCGTCCTTT ATGCTTACAC CCGAGGGTAA GGAAATCCCT AAGGCCGATG CTAAAAAATA CCCTATCTAT CAGATGGACT ACAATTTGCT GAAACAGTTT GATCTGGGCA GCAAATTTCT GGCAGCTTTT CCTGAACAGA AAAAGATAAA AACGAATATA CCTTTGCTGG CCGATCTGAT TGATGAGGTA CAAACTTACT CTAAAGGAAA AAGGCAGCTA TTCTACAACA TAGAAACCAA ATGTAGCGCA AAAGGTGATG GCATTGTAAA CCCCGGGCCA GAGCAATTTG TAAAACTGCT GATGGATGTG ATACAGAAAA AAGGTATTAC CCCTTATGTA GTGATCCAGT CGTTCGACAA AAGGACCCTG CAGATCCTGC ATAAAAAATA TCCCGAAGTA AGAACATCCT TTCTGGTAGA CAACAAAAAT ACAGTAGCCG AAAACCTGGC CGACCTTGGT TTTAATCCAT TCATTTTGAG CCCGGCCTTT AAAATGGTAA ATGAGGAACT GGTTAAGCAA TGTCACGACC GGAATGTTAA AGTTATTCCC TGGACACCCA ATACCAAAGC GGATATCGAC AATTTAAAGC AGCTAAAGGT AGATGGCATC ATTTCCGATT ACCCTAACCT GCTGGTCAAT TAG
|
Protein sequence | MKNIICVTSL ALLSLSGCKT MQNTKSITKA EFPAFSTEAH RGGRGLMPEN TIVAMRNAID IGVTTLEMDT HITKDGQVVV THDDYLSPSF MLTPEGKEIP KADAKKYPIY QMDYNLLKQF DLGSKFLAAF PEQKKIKTNI PLLADLIDEV QTYSKGKRQL FYNIETKCSA KGDGIVNPGP EQFVKLLMDV IQKKGITPYV VIQSFDKRTL QILHKKYPEV RTSFLVDNKN TVAENLADLG FNPFILSPAF KMVNEELVKQ CHDRNVKVIP WTPNTKADID NLKQLKVDGI ISDYPNLLVN
|
| |