| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0551 |
|---|
| Symbol | |
|---|
| ID | 8251638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 656963 |
|---|
| End bp | 657979 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644934201 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003090837 |
|---|
| Protein GI | 255530465 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.274192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0300917 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACATA TAAGCTCAAA AGTAAAATTT GCAGTTATCG GTTTTGGCTA TATAGGAATG
CGGCATGCAA ATACCATTTT AAGTAACGAA AGTTGCGAAT TGGTCGCTTT GATTGATGTT
AAACAGCAGG ATCCTCTGGC GATTGAGAAA TATGATGTGC CTTTTTTCTT TTCTTTAGAT
GCCTTTTTTG ATTCCGAAAT TCAGGCAGAC GTCATAACTA TTGCCTCGCC AAATGGATTG
CATGCAGAGC ATGCAATGAA ATGCTTAAAT AGAGGAAAGC ATGTCGTTGT GGAAAAGCCG
ATGGCATTAA ACAAATCTGA TGCGGAAAAA ATGATCTCCA CTGCGCTTAG TGTAAACCGC
CAGATCTTTG TCGTGATGCA GAACCGGTAT GCTCCTCCTG TTACCTGGAT TAAGGGATTA
CTTGAAAAAG AGCAGCTGGG AAAAATTTAC CTGGTCCAGG TAAATTGCTT TTGGAACAGA
GACGAACGAT ACTATAAAGC TGGCGGATGG CATGGTAAAC AGGATATGGA CGGTGGCCCT
CTTTTTACGC AATTTTCACA TTTTATAGAT ATCATCTATT GGCTTTTTGG TGACATCATT
AATATTCAGG GCAGATTTAA AGATTATAAC CATCAAACAC TTACCGAGTT TGAAGATAGT
GGCTTTGTGA GCTTCGATTT TATAAATGGA GGCATGGGAA CCTTAAATTA TTCAACTGCT
GTTTGGAACC AGAACCTGGA AAGTTCCATG ACAATTATTG CAGCAAACGG ATCTATAAAG
ATTGGTGGTC AATACATGGA TAAGGTCGAA ATCTGCAATG TAAAGGGTTA TGAAATGCCA
GAGAATGATC ATGGGGCCTC CAAGGGTTCA GTGGCTAATC ACCAGTATGT GATCAGGAAT
GTGGTGGATG TACTAAACGG ACGGGCTTCA ATTGCAACCA ATGCATTGGA AGGGCTGAAG
GTTGTGGATA TCATTGAACG GATTTACAAT TGCAAAATTC ACATTTATAA TCAATAG
|
|---|
| Protein sequence | MAHISSKVKF AVIGFGYIGM RHANTILSNE SCELVALIDV KQQDPLAIEK YDVPFFFSLD
AFFDSEIQAD VITIASPNGL HAEHAMKCLN RGKHVVVEKP MALNKSDAEK MISTALSVNR
QIFVVMQNRY APPVTWIKGL LEKEQLGKIY LVQVNCFWNR DERYYKAGGW HGKQDMDGGP
LFTQFSHFID IIYWLFGDII NIQGRFKDYN HQTLTEFEDS GFVSFDFING GMGTLNYSTA
VWNQNLESSM TIIAANGSIK IGGQYMDKVE ICNVKGYEMP ENDHGASKGS VANHQYVIRN
VVDVLNGRAS IATNALEGLK VVDIIERIYN CKIHIYNQ
|
|---|
| |