Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0550 |
Symbol | |
ID | 8251637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 656382 |
End bp | 656963 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644934200 |
Product | transferase hexapeptide repeat containing protein |
Protein accession | YP_003090836 |
Protein GI | 255530464 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1045] Serine acetyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.259438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0248751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTAA AAAAATATTA TTGTCATCCT ACAGCAATTG TAGATGAGGG TGCCATTATT GGTGATGATG TGAAGATCTG GCATTTCTCT CATATTATGC GGGATGCAAA AATTGGTAGT CGTTGTAATA TCGGGCAGAA TGTAATGATT GCAAGCCAGG TAGTTTTAGG TCAGAATGTA AAGGTTCAAA ATAATGTATC TATTTATGAA GGTGTGATAT GTGAAGATGA TGTTTTTCTG GGGCCTTCTA TGGTTTTTAC CAATGTAATT AATCCTCGTA GCGCCGTTAA CAGAAGAGGT AAGTATTTAA GAACACATGT TGGAAAAGGA GCAAGTATTG GAGCCAATGC AACAATTGTT TGCGGCCATG ATATTGGTAG TTATGCGTTA ATTGGAGCGG GGGCTGTGAT TATCAAACCA GTGTTACCCT ATGCCTTAGT GGTTGGAAAC CCGGCTAAAC AAATAGGTTG GGTAAGTGAA TACGGTCATC GGTTGATTTT TGATGAAGGA TTTAAAGCCA TTTGTCCGGA AACTCAACAG CAATATGAAT TGAAAGGTAA TCTTATCATC AAGATCAGCT AA
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Protein sequence | MSLKKYYCHP TAIVDEGAII GDDVKIWHFS HIMRDAKIGS RCNIGQNVMI ASQVVLGQNV KVQNNVSIYE GVICEDDVFL GPSMVFTNVI NPRSAVNRRG KYLRTHVGKG ASIGANATIV CGHDIGSYAL IGAGAVIIKP VLPYALVVGN PAKQIGWVSE YGHRLIFDEG FKAICPETQQ QYELKGNLII KIS
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