| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0534 |
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| Symbol | |
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| ID | 8251621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 641253 |
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| End bp | 642356 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644934184 |
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| Product | DNA replication and repair protein RecF |
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| Protein accession | YP_003090820 |
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| Protein GI | 255530448 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.921957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000241058 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGGTTAA AAAACATTAC CCTTCTTAAT TTTAAGAACT ATACAGATGC AAATGTTAGT
TTTTCAAAAA CAGTAAATGC TTTTGTAGGG GATAATGGAG CGGGTAAAAC CAATTTACTC
GATGCCATCC ATTACCTTTG CCTGTGCAAA GGGTACTTTA ATCCAATCGA TACACAGCAG
ATCAAGGCGG GGCAGGACCT GTTTTTAATT CAGGGAGATT TTGATCGTCA GGAAAAAAAT
GAAAAGATCA CCTGCGGGGT AAAAAGAAAT CAGAAGAAAC AGTTTAAGCG AAATAAAAAA
GAATACGACA AACTGGCCAA TCATATCGGA CTTTTTCCAC TGGTCATGAT CTCGCCCTAT
GATACCAATA TTATTATGGA GGGAAGTGAG GAAAGACGGC GTTTTATGGA TAACGTGATT
TCGCAGACTG ATACAAATTA CCTGGATGAA CTGATTCTGT ACAACCGACA TTTGTTGAAC
CGGAACGCCC TGCTAAAACA AATAGCGGTA ACCAGAAGTT ATGATCCTAC CTTGCTGGAA
ATCTATAACG ATCAGCTTGT GGCTTCAGGT TTAAAGATAT ATGCCAAACG GCAGCAGTTT
ATGATTGAAT TTATTCCCTT GTTTGATAAA TATTACCAGT TTTTAACAGA AGATCAGGAA
AGGGTAAGTT TGCAATATCA GAGTCAGCTG AATGATGCTG CCTTTGAGCA ATTGCTGCAG
CAGTCTGTAG AAAAAGACAA GGTGCTGGAA AGAACGACTA CGGGTATTCA TAAGGATGAG
CTGATATTTA CCATTAGCGA TATGGCGTTA AAGAAGTTTG GCTCACAGGG GCAACAAAAA
TCTTTTTTAA TTGCACTGAA ACTGGCGCAA TATGCTTATC TTCAGAAATA TAAAGGCTTT
AAACCTTTGC TGTTGCTGGA CGATATTTTT GATAAACTGG ATGATAAGCG GATGCATAAA
CTGATGGAAA TGGTATCACA CCATGATTTT GGACAGATCT TTATAACAGA TACGGGGAAG
GAAAGGGTGC TGGCGGTATT TAATAAAATT CAGGTACCGG TAACTTTGTT TGAAGTCAAT
AACGGGGCAA TCAACCATGC GTAA
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| Protein sequence | MWLKNITLLN FKNYTDANVS FSKTVNAFVG DNGAGKTNLL DAIHYLCLCK GYFNPIDTQQ
IKAGQDLFLI QGDFDRQEKN EKITCGVKRN QKKQFKRNKK EYDKLANHIG LFPLVMISPY
DTNIIMEGSE ERRRFMDNVI SQTDTNYLDE LILYNRHLLN RNALLKQIAV TRSYDPTLLE
IYNDQLVASG LKIYAKRQQF MIEFIPLFDK YYQFLTEDQE RVSLQYQSQL NDAAFEQLLQ
QSVEKDKVLE RTTTGIHKDE LIFTISDMAL KKFGSQGQQK SFLIALKLAQ YAYLQKYKGF
KPLLLLDDIF DKLDDKRMHK LMEMVSHHDF GQIFITDTGK ERVLAVFNKI QVPVTLFEVN
NGAINHA
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