| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0533 |
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| Symbol | |
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| ID | 8251620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 640422 |
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| End bp | 641093 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644934183 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003090819 |
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| Protein GI | 255530447 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000139229 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCTGTAG CAGAAAAAGA AATAAATCAA CCGGTAAGAA AAGGCTCTTT TTTAGAAGAA
AATTCGAAAA GTCTTTTATT CATTGCAGGT GCAGTTGTTG TATTGGTAGC CATTTACTTT
TGGTACCAGA ATGTATACCT TAAAAACAGA GCTGAAGAAG CTTCTGCAAA AATGTATAGG
GCAGAACAAT ACATTGGTGG TCCGGATTCA CTGGCCAACA AGGCTATAAA TGGTGAAGGT
GGTTACCCGG GTTTAGAAAA AATAGCTGAT GAGTATGACA ATACCAAATC TGCAAATCTT
GCCAATCTAT ATCTTGGCGG TATTTATTTA CGTAAAGGTG AGTATAAAAA AGCTACTGAA
GTTTTAGGAA AATATTCGGA AACCGGAAGT GTAGTTGCAG ATCCGCTGGC ACTGGGACTT
TTGGGCGATG CTTACAGTGA GCTGAAAGAT TTCAAGCAGG CAGCCACTTA TTATAAAAAA
GCGGCCGACA AAGCCAGCAA TAAATTTACT TCACCAATGT TTCTTAAAAA ACTAGGTTTG
GTTTATGAAA ATAACAAGGA TTTTAAATCG GCTGAAGAGG CTTACACCAA GATAAAAACA
CAGTATCCTG AAAGTCAGGA AGCAGCAATG ATAGATGAAT ACATTGCACG TGCTGCTGCG
CAGGTAAAAT AA
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| Protein sequence | MSVAEKEINQ PVRKGSFLEE NSKSLLFIAG AVVVLVAIYF WYQNVYLKNR AEEASAKMYR
AEQYIGGPDS LANKAINGEG GYPGLEKIAD EYDNTKSANL ANLYLGGIYL RKGEYKKATE
VLGKYSETGS VVADPLALGL LGDAYSELKD FKQAATYYKK AADKASNKFT SPMFLKKLGL
VYENNKDFKS AEEAYTKIKT QYPESQEAAM IDEYIARAAA QVK
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