Gene Phep_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0528 
Symbol 
ID8251615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp638014 
End bp638475 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content40% 
IMG OID644934178 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003090814 
Protein GI255530442 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000014473 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAAAA AAGGAGAGAG GGCACCAGAT TTTACATTGT ATGCCACACC CGATCAGAAA 
ATTGTATTGA GTGAATTAAA AGGAAAAAAT GTGATCCTTG CATTTTATCC GGCCGACTGG
AGTCCGGTTT GCAGTGATCA GATGGCACTT TACAACGAAA CCCTGAAATA TTTTTCAAAA
CATGATGCGA TGCTATTGGG TATATCTGTG GATAGTAAAT GGTGCCACCT CGCTTTTTCA
CAGTCGAGAA ACCTACATTT TCCGCTACTG GCTGATTTTG AACCTAAAGG TGAAGTGTCA
AAAAAGTATG GGGTTTATGA TGACGAAGAG GGAGAATGCA AAAGGGCATT ATTTGTAATT
GATAAGGAAG GAAGGATTGC CTGGAGCTAT TTGTCACCCA CTGCAATTAA CCCAGGTGCT
GACGGCATAC TGGATGCACT TGAATCATTA AAGAAAAAAT AA
 
Protein sequence
MLKKGERAPD FTLYATPDQK IVLSELKGKN VILAFYPADW SPVCSDQMAL YNETLKYFSK 
HDAMLLGISV DSKWCHLAFS QSRNLHFPLL ADFEPKGEVS KKYGVYDDEE GECKRALFVI
DKEGRIAWSY LSPTAINPGA DGILDALESL KKK