Gene Phep_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0514 
Symbol 
ID8251601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp621756 
End bp622175 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content41% 
IMG OID644934164 
Productprotein of unknown function DUF306 Meta and HslJ 
Protein accessionYP_003090800 
Protein GI255530428 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3187] Heat shock protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.090851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0795562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA TCATCTTTGT TATGCTCTTC AGTGTAAGTG CATTAACTGC CTGCAACATG 
AGAAAACACG ACCAGTCGGC CCAAAAATTA ACCGGCCAGT GGGAACTAAA TTACATTACC
GGCCCAAGGA TTGCCTTTAA CGGATTATAT CCTAACGCCA AGCCCATCAT TAATTTTAAA
GAGAACCCCG AAGAGATCAA TGGCAATACC AGCTGTAACG GTTTTAGCTG CAAACTAACC
ATCGATGGCA ATAAAATGAC TATTGCTGAA CCAGGTCCAA TGACCATGCG GTACTGTGAA
GGCGGAGGGG AAAAGGTTTT TTTAGATATG CTAAAAAAAG TGAATGCCTA TGAAGTTAAA
GAAAATACAC TGACTATGCT GCAAGGTGAT CTGCCATTGA TGCGCTTTAC AAAAAAGTAG
 
Protein sequence
MKTIIFVMLF SVSALTACNM RKHDQSAQKL TGQWELNYIT GPRIAFNGLY PNAKPIINFK 
ENPEEINGNT SCNGFSCKLT IDGNKMTIAE PGPMTMRYCE GGGEKVFLDM LKKVNAYEVK
ENTLTMLQGD LPLMRFTKK