| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0512 |
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| Symbol | |
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| ID | 8251599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 620205 |
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| End bp | 620756 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644934162 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003090798 |
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| Protein GI | 255530426 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.196327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0867918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCAACAG CAAAAAAAAT ATCCCTCTCC GAAGAAGAGC TGGTTAGCGC CCTAAAAAGA
CGCGACACTG TTGCTATTCA AGCCCTGTAC GACATGTACT CAGGCGCATT ACTAGGCGTT
ATATCCAGAA TTATAGTACA AACGGAAGTA GCGGAAGACT TATTACAAGA GGCATTCATA
AAAATCTGGA ATTCGGCTGA TAGCTACGAT CCAACAAAAG GACGTTTGTT TACCTGGATG
TTAAATATTA CCCGCAACTT ATCCATCGAT AAATTGCGTT CAAAAGATTT TAAGAATGCT
GGTAAAAACC AGGATATAGA AAATAACGTA GATTTCATTG ACGCGCAGAA AGAAGTTACT
TTTAATGCAG ATACTTTGGG CGTAAAAGAC ATGGTCAATG CACTTAAACC TGAGTTTAAT
GCAGTTTTGA ACATGGTGTA TTTTAAGGGA TATACGCATA TAGAAGCGGC AGAAGAATTA
AATTTGCCAT TGGGTACCGT AAAAACACGA ATCCGGATGG CTATTATGGA ATTAAGAAAG
AATTTTAATT AA
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| Protein sequence | MATAKKISLS EEELVSALKR RDTVAIQALY DMYSGALLGV ISRIIVQTEV AEDLLQEAFI
KIWNSADSYD PTKGRLFTWM LNITRNLSID KLRSKDFKNA GKNQDIENNV DFIDAQKEVT
FNADTLGVKD MVNALKPEFN AVLNMVYFKG YTHIEAAEEL NLPLGTVKTR IRMAIMELRK
NFN
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