| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0502 |
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| Symbol | |
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| ID | 8251589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 602676 |
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| End bp | 604709 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934152 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003090788 |
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| Protein GI | 255530416 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00011099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAATT TTAATAACGA TCTAAGAATG AAGAATATAA TGAGAATAAT AGTAGCCTTT
TCCCTGATGG GAATGATGAG CTGCAAATAC CTGGATGTGG TACCAAATGA CACAGCGACA
TTGGACCACG CCTTCTCCAA TCGCTCCGTA ATGGATAAGT TTCTGAGGAC ATGTTACTCA
CACTTGCCAG ATCCGACCAA TCCATTTTAC TACCCTGCCT ATTTTACCAG CAGGGACGAG
TTTGACTGGA GGAGCGATAG CAGGGCTGGA AATACGCCCG CCGGCCAGAT TTCCCGTGGA
CTTCAAAACA CCAATAATCC ACTGCAGGAT TACTGGACGG GAGGTCAGGG AGGTAATTCA
ATGTATAGGG CCATACGTGA CTGCAATATT TTTCTGGAAA ACGCACATAT TCCCCGTGAT
ATCGATGAAC TGGAACGCGC CCGATGGATC GCTGAAGTGA AATTCCTAAA GGCCTATTAC
CATTTCTTTT TAATGCAATT GTATGGCCCC ATCGTGTTGG TGAAAGAAAA CCTGCCCTTA
TCGGCTACTC CTGAGGAAAC GAAAGTATAT CGCGAACCAG TGGATGAATG TGTAGACTAC
ATCGTGCAGT TGCTGGATGA GGCTGCGGTT GATTTACCAT TGGCACTTCC AGATCCGGCG
ACAGAACAAG GCCGGATTTC CAAAACTATT GCATTGGGCA TCAAGGCGAA AGTCTTAGCC
TGGGGAGCCA GCCCATTATT TAACGGCAAT CCGGATTATG CAGGTTGGAT CGATAAACGC
GGGAAACAAT TGATATCCAC TACTGCTGAC CCTAAAAAAT GGGAGAGAGC TGCTGTAGCC
ATAAAGGAGG CAATTGATGC TGCCCATGCT GCCGGACACC GCTTATATGA ATTCAACAAG
TTCGCGGGTG GCGCCCAAAC ATTCGCGATG AATGACAGTT TGGTGCAGTT GATGACTGTC
AGAAAGGCGA TCACTGAATC GATCGACCGA AATACAGGAG TAATCTGGGC CACACAGGAA
CAATTTGCAA ATGGTAAAGG TGGTTCCAGC TTTGCTCCGC TAGGAAATAT GCTTGCAAGT
CTTTTTCCGG TATTGTATAG TACGGATCAG CCTAGTTATG TCAACTACAT GTCTGCTTCC
TGGCATATGG GTGAATTGTT TTATTCCAAC AAGGGTGTTC CGATTAATGA AGATAAAACG
TATGACTACA ATAACAGATA TAGCTTAAAA CGGGCAACGT TGGCAGATCA TCATGAATCT
TATATTGCTA CCGGCGAAGT AACCGTCCTT CTTCACTTCT TCCGGGAGCC GCGTTTTTAC
GCCAATTTAG GGATCGACAG AGGATTCTTT GAGCTATCCA CTACTACAAC CAATGGCGGT
GTCTCATTTG CCCCCTTCAT TAAGAGTCGT CCCGATGAGG TTGGACCTGC AGCGGGCCAT
GGTGCATATA CGCCTAAAAA GATTATCCCC TTTGAGTCAT CCGCCAGCCA GGGAGATGTG
AATAAGCGAT ATACAGCATA TCCTTATAAC TTTCCTTTAC TACGCTTATC AGATCTTTAT
CTCCTTTACA GCGAGGCACT GAACGAAACA AAGGGCCAGC CAGATGCAGA GGTCTACAAA
TGGATTGACG AGGTGCGCGC TGTGGCGGGA TTGAATGGCG TAGTACAGTC GTGGCAGCAA
GCGGCCTTTA ATCCTGACGC ACCATCAAAT AAAAATGAGA TGCGTAAAAT TATTCAAAGA
GAGCGCCTGA TCGAGCTCTC ATTTGAGGGA CAACGCTTTT GGGATATACG TCGATGGAAA
ATGGCTGCTC AGTATTGGAA CCTCCGTCCA ATGTCCTGGA CTCCATCAAG AGAAACTGAA
AAATTTTATG TTCCTTTCGT CTATAGTCCA GTCGTACGCC AGGTTACATT TAGAGATTAC
TTGTATCCAA TCAGAGACTA CGACTTACGG ATTAATCCAA ATTTGGTTCA AACATATGGT
TGGGTAATAA CGCTAAGTAC AGCATTGGAA TTATTAATAA AGATTAATTT ATGA
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| Protein sequence | MLNFNNDLRM KNIMRIIVAF SLMGMMSCKY LDVVPNDTAT LDHAFSNRSV MDKFLRTCYS
HLPDPTNPFY YPAYFTSRDE FDWRSDSRAG NTPAGQISRG LQNTNNPLQD YWTGGQGGNS
MYRAIRDCNI FLENAHIPRD IDELERARWI AEVKFLKAYY HFFLMQLYGP IVLVKENLPL
SATPEETKVY REPVDECVDY IVQLLDEAAV DLPLALPDPA TEQGRISKTI ALGIKAKVLA
WGASPLFNGN PDYAGWIDKR GKQLISTTAD PKKWERAAVA IKEAIDAAHA AGHRLYEFNK
FAGGAQTFAM NDSLVQLMTV RKAITESIDR NTGVIWATQE QFANGKGGSS FAPLGNMLAS
LFPVLYSTDQ PSYVNYMSAS WHMGELFYSN KGVPINEDKT YDYNNRYSLK RATLADHHES
YIATGEVTVL LHFFREPRFY ANLGIDRGFF ELSTTTTNGG VSFAPFIKSR PDEVGPAAGH
GAYTPKKIIP FESSASQGDV NKRYTAYPYN FPLLRLSDLY LLYSEALNET KGQPDAEVYK
WIDEVRAVAG LNGVVQSWQQ AAFNPDAPSN KNEMRKIIQR ERLIELSFEG QRFWDIRRWK
MAAQYWNLRP MSWTPSRETE KFYVPFVYSP VVRQVTFRDY LYPIRDYDLR INPNLVQTYG
WVITLSTALE LLIKINL
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