Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0499 |
Symbol | |
ID | 8251586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 596448 |
End bp | 597287 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644934149 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_003090785 |
Protein GI | 255530413 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.809571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGCAG GCGTTTTAAA ATTGTTAACC AAAAGAAGGA GGAAAATGAT AAAGAAACAC ATCATACCAT GTACGGTAAT TATTGCATTA CTGGTTATGG CAAAAGTGTT TGCTTACAAC ATGCCCCAAG CAGCGGAGAG TATTTCAAAA GAAGAAAAAA GTACAACAAA AAAAGACACA GTAACAACAA AGATCAGGAA GCCATTATCT CTTATGGCTC AGTTAAATTT TGCAGAAGAG TCGCTACCTA TTGGTGATGC CAGGGTAGAG AAAAAAATGA AAAAGACACT CGCTGCACAT TATTTCAGCA ATTTACAAAC CAATATGCTG CACAGAAAGG CAGCGGAATG GTTTCCGATT ATCGAACCTA TCCTGGCCGC TTACGGCATT CCGGAAGATT TTAAATATAT GCCTTTGGTA GAGTCGGGGT TAAATAGTGG GGTTTCGCCT AAAGGTGCTG CAGGTTTCTG GCAATTTATG CCCGGAACTG CCCGAATGTA TGGCTTAAAA GTGAATTCAA AGGTAGATGA GCGCAACAAC TTACGTAAAT CTACTATCGC GGCAGCCAAA TACATTAAAG AGCTTTATGG CATTTTTGAC AGCTGGACAC TGGTTGCTGC TGCTTATAAT GTAGGCGACA GCCACATGAA GCGCCAGATT AACAGGCAAA ACCAGGATAA TTATTTTAAG ATGAAGCTGA ACAATGAAAC GGGGGGCTAT GTTTATAAAC TGATATCCAT GAAAGAGATC ATGAAAGATC CGGTTCGTTA TGGCTATAGG GCCCCAAGGG CCTTGCTGGC TTATAATGCA GAAAAAGCTG AAGAAAAACG TTCAGAATAA
|
Protein sequence | MFAGVLKLLT KRRRKMIKKH IIPCTVIIAL LVMAKVFAYN MPQAAESISK EEKSTTKKDT VTTKIRKPLS LMAQLNFAEE SLPIGDARVE KKMKKTLAAH YFSNLQTNML HRKAAEWFPI IEPILAAYGI PEDFKYMPLV ESGLNSGVSP KGAAGFWQFM PGTARMYGLK VNSKVDERNN LRKSTIAAAK YIKELYGIFD SWTLVAAAYN VGDSHMKRQI NRQNQDNYFK MKLNNETGGY VYKLISMKEI MKDPVRYGYR APRALLAYNA EKAEEKRSE
|
| |