Gene Phep_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0496 
Symbol 
ID8251583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp592227 
End bp593372 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content43% 
IMG OID644934146 
Productglycosyl transferase group 1 
Protein accessionYP_003090782 
Protein GI255530410 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG GTATTGTTTG TTACCCAACT TTTGGAGGGA GTGGCGTAGT GGCTACTGAA 
CTTGGAAAGG CGCTTGCCGA TGAAGGTCAT CAGGTGCATT TTATCACATA TAGCCAGCCT
GCACGACTCG ACTTTTTCTC TGCCAACCTT TTTTATCATG AAGTTTCCGT AAGGGATTAT
CCTTTGTTCG ATTATGCACC TTACGAATCG GCACTGGCCA GCAAGCTGGT AGATGTGGTG
CGTTTTGAAA AGCTCGATAT CCTGCATGTA CATTATGCCA TCCCGCATGC TTCGGCGGCC
TTTATGGCCC AGCAGATCCT GGAAACGTAT GGTATTTTTA TCCCTTTTGT AACCACATTA
CACGGAACCG ATATTACTCT GGTAGGTAAA GATCCAACCT ATAAGCCGGT AGTTACCTTC
TCTATCAATA AATCTAATGG CGTAACCACC GTGTCCGAAA GTTTAAAAAA AGATACAGAA
GAGCATTTTG AAATTACCAA TGAGATTAAG GTAATCCCCA ATTTTATAGA TTTCAGCCGC
TTTAGCTTAA AACCTAAAGA TCATTTTAAA AAGGCCATTG CGCCAAACAA CGAGCGCATA
CTGATCCATA CTTCCAATTT CAGAAAGGTT AAACGTACTG CCGACGTAAT CAGGATTTTC
CAGAAGATCC AGGAAAAGAT CCCTTCCAAA TTGTTAATGG TAGGGGATGG ACCTGAACGT
GCCTATGATG AACAGCTTTG CAGAAGCCTG GGCATTTGCG AGCATGTCCG TTTTCTGGGC
AAACAGGATG CAGTAGAAGA AATTCTTTCT GTGTCTGACC TGTTTTTAAT GCCTTCAGAG
TCTGAGAGCT TCGGTTTGGC GGCATTGGAG GCCATGGCCT GTAAAGTTCC GGCTATTACT
TCTAATTCTG GTGGTTTGCC GGAACTCAAT ATAGATGGTT TCTCGGGCTT TATGAGCAAT
GTCGGGGATG TGGAAGATAT GGCCAATAAG GCCATACATA TTCTGGAAAG CGATGGGGTG
CTGCAGCAGT TTAAAGAAAA TGCATTTGCA AGGGCACAGG ATTTTGATTT GAAAAAGATC
CTTCCGGATT ATGTAAATTA TTACAATAAA GTTATTGAGG AATCGCACAA ACTACACAAA
GTGTAG
 
Protein sequence
MKIGIVCYPT FGGSGVVATE LGKALADEGH QVHFITYSQP ARLDFFSANL FYHEVSVRDY 
PLFDYAPYES ALASKLVDVV RFEKLDILHV HYAIPHASAA FMAQQILETY GIFIPFVTTL
HGTDITLVGK DPTYKPVVTF SINKSNGVTT VSESLKKDTE EHFEITNEIK VIPNFIDFSR
FSLKPKDHFK KAIAPNNERI LIHTSNFRKV KRTADVIRIF QKIQEKIPSK LLMVGDGPER
AYDEQLCRSL GICEHVRFLG KQDAVEEILS VSDLFLMPSE SESFGLAALE AMACKVPAIT
SNSGGLPELN IDGFSGFMSN VGDVEDMANK AIHILESDGV LQQFKENAFA RAQDFDLKKI
LPDYVNYYNK VIEESHKLHK V